Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5639

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,452,305	+		Pf6N2E2_5638	0.35	-0.2
6,452,306	-		Pf6N2E2_5638	0.35	+0.4
6,452,498	-		Pf6N2E2_5638	0.54	-0.4
6,452,498	-		Pf6N2E2_5638	0.54	+0.9
6,452,640	+		Pf6N2E2_5638	0.68	+2.2
6,452,640	+		Pf6N2E2_5638	0.68	-2.5
6,452,640	+		Pf6N2E2_5638	0.68	-1.3
6,452,640	+		Pf6N2E2_5638	0.68	+1.3
6,452,640	+		Pf6N2E2_5638	0.68	-0.9
6,452,640	+		Pf6N2E2_5638	0.68	-1.2
6,452,640	+		Pf6N2E2_5638	0.68	+0.9
6,452,640	+		Pf6N2E2_5638	0.68	+1.0
6,452,641	-		Pf6N2E2_5638	0.68	-2.8
6,452,641	-		Pf6N2E2_5638	0.68	-2.2
6,452,641	-		Pf6N2E2_5638	0.68	-2.0
6,452,641	-		Pf6N2E2_5638	0.68	+1.2
6,452,672	-		Pf6N2E2_5638	0.71	-2.3
6,453,001	+				+2.1
6,453,096	-				+0.9
6,453,131	+				-0.1
6,453,131	+				+0.1
6,453,131	+				-1.6
6,453,131	+				-0.0
6,453,132	-				+0.4
6,453,132	-				+0.4
6,453,132	-				-0.6
6,453,132	-				-0.2
6,453,132	-				-2.1
6,453,132	-				+2.0
6,453,132	-				-0.0
6,453,132	-				+1.5
6,453,132	-				-0.9
6,453,132	-				+1.3
6,453,135	+				+0.2
6,453,135	+				+0.1
6,453,135	+				+0.6
6,453,135	+				+0.6
6,453,135	+				-0.2
6,453,136	-				+1.8
6,453,136	-				-0.7
6,453,136	-				+1.6
6,453,136	-				+0.8
6,453,136	-				-2.2
6,453,136	-				+0.5
6,453,197	+				-1.6
6,453,197	+				+0.1
6,453,330	-				-0.3
6,453,330	-				-2.7
6,453,330	-				+1.8
6,453,461	+		Pf6N2E2_5639	0.15	-0.6
6,453,461	+		Pf6N2E2_5639	0.15	+0.2
6,453,462	-		Pf6N2E2_5639	0.15	+1.7
6,453,462	-		Pf6N2E2_5639	0.15	+1.4
6,453,882	-		Pf6N2E2_5639	0.41	+0.3
6,453,960	+		Pf6N2E2_5639	0.46	-0.9
6,454,469	-		Pf6N2E2_5639	0.77	-0.3
6,454,512	+		Pf6N2E2_5639	0.80	-0.7
6,454,512	+		Pf6N2E2_5639	0.80	-2.1
6,454,513	-		Pf6N2E2_5639	0.80	-0.8
6,454,513	-		Pf6N2E2_5639	0.80	-2.2
6,454,741	+				+1.6
6,454,741	+				-0.2
6,454,827	+				+1.8
6,454,828	-				+0.7
6,454,855	+				+0.8
6,454,862	-				-0.5
6,455,012	+		Pf6N2E2_5640	0.31	-1.2
6,455,013	-		Pf6N2E2_5640	0.31	+1.8
6,455,199	+				+1.3
6,455,260	+				+0.4
6,455,289	+				+1.8
6,455,289	+				-2.7
6,455,290	-				+1.4
6,455,300	+				+0.4
6,455,300	+				-1.0
6,455,351	+				-2.6
6,455,405	+				-0.5
6,455,406	-				+2.0
6,455,495	+		Pf6N2E2_5641	0.11	-3.6
6,455,495	+		Pf6N2E2_5641	0.11	+1.4
6,455,495	+		Pf6N2E2_5641	0.11	-2.5
6,455,496	-		Pf6N2E2_5641	0.11	-2.2
6,455,496	-		Pf6N2E2_5641	0.11	-1.8
6,455,529	-		Pf6N2E2_5641	0.14	-1.4
6,455,562	-		Pf6N2E2_5641	0.16	+1.5
6,455,681	+		Pf6N2E2_5641	0.25	-0.5
6,455,681	+		Pf6N2E2_5641	0.25	+1.4
6,455,682	-		Pf6N2E2_5641	0.25	+2.4
6,455,682	-		Pf6N2E2_5641	0.25	+0.1
6,455,682	-		Pf6N2E2_5641	0.25	+2.4
6,455,684	+		Pf6N2E2_5641	0.25	+0.8
6,455,684	+		Pf6N2E2_5641	0.25	+1.2
6,455,685	-		Pf6N2E2_5641	0.25	-0.1