Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5225

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,023,334	+				-2.3
6,023,334	+				-2.5
6,023,334	+				-3.4
6,023,339	+				-1.0
6,023,436	-				-2.0
6,023,437	+				-1.5
6,023,466	+				-2.4
6,023,466	+				-0.1
6,023,466	+				-2.3
6,023,466	+				-0.2
6,023,466	+				-0.6
6,023,467	-				+0.3
6,023,467	-				+0.7
6,023,548	+		Pf6N2E2_5225	0.10	+0.3
6,023,548	+		Pf6N2E2_5225	0.10	-2.9
6,023,548	+		Pf6N2E2_5225	0.10	-1.0
6,023,548	+		Pf6N2E2_5225	0.10	+0.3
6,023,548	+		Pf6N2E2_5225	0.10	-1.2
6,023,548	+		Pf6N2E2_5225	0.10	-1.3
6,023,548	+		Pf6N2E2_5225	0.10	-2.3
6,023,548	+		Pf6N2E2_5225	0.10	-2.0
6,023,548	+		Pf6N2E2_5225	0.10	+0.7
6,023,549	-		Pf6N2E2_5225	0.11	-2.9
6,023,549	-		Pf6N2E2_5225	0.11	-2.3
6,023,549	-		Pf6N2E2_5225	0.11	-1.0
6,023,611	+		Pf6N2E2_5225	0.23	-1.5
6,023,612	-		Pf6N2E2_5225	0.23	-2.5
6,023,695	+		Pf6N2E2_5225	0.39	-1.4
6,023,695	+		Pf6N2E2_5225	0.39	+0.2
6,023,696	-		Pf6N2E2_5225	0.39	-0.2
6,023,696	-		Pf6N2E2_5225	0.39	+0.8
6,023,696	-		Pf6N2E2_5225	0.39	-0.2
6,023,696	-		Pf6N2E2_5225	0.39	-1.8
6,023,696	-		Pf6N2E2_5225	0.39	-3.6
6,023,697	+		Pf6N2E2_5225	0.39	-0.7
6,023,697	+		Pf6N2E2_5225	0.39	-3.0
6,023,697	+		Pf6N2E2_5225	0.39	-3.0
6,023,697	+		Pf6N2E2_5225	0.39	-2.8
6,023,697	+		Pf6N2E2_5225	0.39	-0.0
6,023,697	+		Pf6N2E2_5225	0.39	-1.5
6,023,697	+		Pf6N2E2_5225	0.39	-1.5
6,023,697	+		Pf6N2E2_5225	0.39	-1.2
6,023,698	-		Pf6N2E2_5225	0.39	-1.4
6,023,701	+		Pf6N2E2_5225	0.40	+0.5
6,023,701	+		Pf6N2E2_5225	0.40	-2.7
6,023,701	+		Pf6N2E2_5225	0.40	-0.2
6,023,701	+		Pf6N2E2_5225	0.40	-1.8
6,023,701	+		Pf6N2E2_5225	0.40	-1.6
6,023,702	-		Pf6N2E2_5225	0.40	+0.5
6,023,702	-		Pf6N2E2_5225	0.40	-0.3
6,023,702	-		Pf6N2E2_5225	0.40	-2.4
6,023,791	+		Pf6N2E2_5225	0.57	-1.7
6,023,791	+		Pf6N2E2_5225	0.57	-0.6
6,023,791	+		Pf6N2E2_5225	0.57	-0.9
6,023,791	+		Pf6N2E2_5225	0.57	-2.4
6,023,791	+		Pf6N2E2_5225	0.57	-2.0
6,023,791	+		Pf6N2E2_5225	0.57	-1.0
6,023,791	+		Pf6N2E2_5225	0.57	-1.1
6,023,792	-		Pf6N2E2_5225	0.57	-1.9
6,023,792	-		Pf6N2E2_5225	0.57	-0.6
6,023,792	-		Pf6N2E2_5225	0.57	-0.8
6,023,792	-		Pf6N2E2_5225	0.57	-0.0
6,023,938	+		Pf6N2E2_5225	0.86	+1.3
6,023,938	+		Pf6N2E2_5225	0.86	+0.0
6,023,975	+				+0.1
6,023,975	+				-0.7
6,023,975	+				-1.5
6,023,975	+				-0.9
6,023,976	-				-0.1
6,023,976	-				-1.2
6,024,008	+				-2.3
6,024,011	-				-0.3
6,024,011	-				+0.1
6,024,055	+				-0.4
6,024,055	+				+1.0
6,024,055	+				+0.6
6,024,056	-				-0.7
6,024,056	-				-4.3
6,024,056	-				+0.7
6,024,056	-				+0.4
6,024,164	-		Pf6N2E2_5226	0.30	+0.2
6,024,164	-		Pf6N2E2_5226	0.30	+1.5
6,024,389	+				-1.3
6,024,390	-				-1.4
6,024,390	-				+1.1
6,024,390	-				-2.1
6,024,390	-				-1.0
6,024,390	-				-0.2
6,024,638	-		Pf6N2E2_5227	0.30	+1.0
6,024,648	+		Pf6N2E2_5227	0.31	+1.3
6,024,751	+		Pf6N2E2_5227	0.45	+0.9
6,024,752	-		Pf6N2E2_5227	0.45	+2.0
6,024,771	-		Pf6N2E2_5227	0.47	+1.1
6,024,860	+		Pf6N2E2_5227	0.59	+0.0
6,024,860	+		Pf6N2E2_5227	0.59	-2.1
6,024,860	+		Pf6N2E2_5227	0.59	+0.5
6,024,860	+		Pf6N2E2_5227	0.59	-0.4
6,024,860	+		Pf6N2E2_5227	0.59	-0.4
6,024,860	+		Pf6N2E2_5227	0.59	-0.1
6,024,861	-		Pf6N2E2_5227	0.59	+1.5
6,024,861	-		Pf6N2E2_5227	0.59	-0.6
6,024,861	-		Pf6N2E2_5227	0.59	-2.3
6,024,861	-		Pf6N2E2_5227	0.59	-2.2
6,024,901	+		Pf6N2E2_5227	0.64	-3.5
6,024,901	+		Pf6N2E2_5227	0.64	-0.0
6,024,901	+		Pf6N2E2_5227	0.64	-2.5
6,024,902	-		Pf6N2E2_5227	0.64	+0.8