Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4951

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,705,904	+				+3.6
5,705,904	+				+1.4
5,705,904	+				+2.1
5,705,904	+				+0.1
5,705,905	-				-1.6
5,705,905	-				+1.4
5,705,905	-				+0.6
5,706,029	+		Pf6N2E2_4950	0.18	-0.3
5,706,029	+		Pf6N2E2_4950	0.18	+1.4
5,706,045	-		Pf6N2E2_4950	0.20	+1.0
5,706,132	+		Pf6N2E2_4950	0.34	-1.1
5,706,132	+		Pf6N2E2_4950	0.34	+0.3
5,706,132	+		Pf6N2E2_4950	0.34	+1.8
5,706,133	-		Pf6N2E2_4950	0.35	+1.1
5,706,133	-		Pf6N2E2_4950	0.35	+2.0
5,706,133	-		Pf6N2E2_4950	0.35	-0.5
5,706,246	+		Pf6N2E2_4950	0.53	-1.3
5,706,247	-		Pf6N2E2_4950	0.53	+1.6
5,706,247	-		Pf6N2E2_4950	0.53	+0.7
5,706,306	+		Pf6N2E2_4950	0.62	+1.1
5,706,307	-		Pf6N2E2_4950	0.63	-2.8
5,706,307	-		Pf6N2E2_4950	0.63	+0.3
5,706,307	-		Pf6N2E2_4950	0.63	+1.0
5,706,307	-		Pf6N2E2_4950	0.63	+2.3
5,706,307	-		Pf6N2E2_4950	0.63	-1.7
5,706,432	+		Pf6N2E2_4950	0.83	+2.0
5,706,433	-		Pf6N2E2_4950	0.83	-1.0
5,706,433	-		Pf6N2E2_4950	0.83	-2.0
5,706,597	-				-2.4
5,706,737	+				+0.8
5,706,737	+				-1.5
5,706,737	+				-0.6
5,706,741	+				-2.5
5,706,741	+				-1.3
5,706,741	+				+0.9
5,706,741	+				+1.2
5,706,741	+				-0.8
5,706,741	+				-1.5
5,706,741	+				-0.7
5,706,741	+				-1.4
5,706,741	+				-0.5
5,706,742	-				-1.1
5,706,742	-				+1.1
5,706,745	+				-0.6
5,706,745	+				+0.3
5,706,745	+				-0.7
5,706,745	+				-2.8
5,706,746	-				+1.4
5,706,746	-				-3.2
5,706,755	+				-3.5
5,706,801	-		Pf6N2E2_4951	0.14	-1.9
5,706,801	-		Pf6N2E2_4951	0.14	+1.0
5,706,801	-		Pf6N2E2_4951	0.14	+1.2
5,706,922	+		Pf6N2E2_4951	0.41	-0.3
5,706,922	+		Pf6N2E2_4951	0.41	-0.7
5,706,922	+		Pf6N2E2_4951	0.41	+2.2
5,706,923	-		Pf6N2E2_4951	0.41	-0.6
5,706,923	-		Pf6N2E2_4951	0.41	+1.5
5,706,923	-		Pf6N2E2_4951	0.41	+0.8
5,706,924	+		Pf6N2E2_4951	0.41	-1.3
5,706,924	+		Pf6N2E2_4951	0.41	+1.2
5,706,925	-		Pf6N2E2_4951	0.42	-0.3
5,706,925	-		Pf6N2E2_4951	0.42	+0.0
5,706,925	-		Pf6N2E2_4951	0.42	+1.9
5,706,925	-		Pf6N2E2_4951	0.42	+1.1
5,706,925	-		Pf6N2E2_4951	0.42	-3.0
5,706,925	-		Pf6N2E2_4951	0.42	-0.3
5,707,218	+				-0.1
5,707,535	+		Pf6N2E2_4952	0.26	-2.1
5,707,571	+		Pf6N2E2_4952	0.29	+1.2
5,707,571	+		Pf6N2E2_4952	0.29	+0.9
5,707,660	+		Pf6N2E2_4952	0.35	+2.1
5,707,742	-		Pf6N2E2_4952	0.41	-1.7
5,707,987	+		Pf6N2E2_4952	0.60	+2.3
5,707,987	+		Pf6N2E2_4952	0.60	-2.4
5,707,987	+		Pf6N2E2_4952	0.60	-1.7
5,707,988	-		Pf6N2E2_4952	0.60	+1.4
5,707,988	-		Pf6N2E2_4952	0.60	+0.1
5,707,988	-		Pf6N2E2_4952	0.60	-2.3
5,707,988	-		Pf6N2E2_4952	0.60	+0.2
5,708,069	-		Pf6N2E2_4952	0.66	+3.0
5,708,069	-		Pf6N2E2_4952	0.66	+0.7