Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4696

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,428,793	-		Pf6N2E2_4695	0.39	-2.7
5,428,849	+		Pf6N2E2_4695	0.44	-2.3
5,428,850	-		Pf6N2E2_4695	0.44	+0.4
5,428,852	+		Pf6N2E2_4695	0.44	-0.4
5,428,939	-		Pf6N2E2_4695	0.52	+1.7
5,429,013	+		Pf6N2E2_4695	0.58	-0.8
5,429,013	+		Pf6N2E2_4695	0.58	-0.3
5,429,013	+		Pf6N2E2_4695	0.58	+0.9
5,429,013	+		Pf6N2E2_4695	0.58	+2.0
5,429,017	+		Pf6N2E2_4695	0.58	+0.4
5,429,017	+		Pf6N2E2_4695	0.58	+1.6
5,429,161	+		Pf6N2E2_4695	0.71	-3.2
5,429,161	+		Pf6N2E2_4695	0.71	-0.9
5,429,219	+		Pf6N2E2_4695	0.76	-0.4
5,429,219	+		Pf6N2E2_4695	0.76	-0.5
5,429,219	+		Pf6N2E2_4695	0.76	-1.7
5,429,220	-		Pf6N2E2_4695	0.76	-0.7
5,429,221	+		Pf6N2E2_4695	0.76	+0.0
5,429,284	+		Pf6N2E2_4695	0.81	-0.8
5,429,285	-		Pf6N2E2_4695	0.81	-1.2
5,429,309	+		Pf6N2E2_4695	0.83	+1.2
5,429,309	+		Pf6N2E2_4695	0.83	+0.9
5,429,310	-		Pf6N2E2_4695	0.84	-2.1
5,429,310	-		Pf6N2E2_4695	0.84	+0.9
5,429,320	+		Pf6N2E2_4695	0.84	-2.6
5,429,320	+		Pf6N2E2_4695	0.84	-3.0
5,429,321	-		Pf6N2E2_4695	0.84	+0.0
5,429,321	-		Pf6N2E2_4695	0.84	-1.8
5,429,341	-		Pf6N2E2_4695	0.86	-1.1
5,429,375	-		Pf6N2E2_4695	0.89	-0.7
5,429,455	+				-3.8
5,429,455	+				-1.0
5,429,455	+				-1.9
5,429,456	-				+0.5
5,429,456	-				+1.7
5,429,456	-				-0.5
5,429,456	-				-0.7
5,429,500	+				-0.2
5,429,500	+				+0.0
5,429,500	+				-2.5
5,429,512	+				-2.2
5,429,512	+				-0.7
5,429,513	-				+1.1
5,429,575	+				-2.8
5,429,575	+				+2.4
5,429,576	-				-0.7
5,429,576	-				+1.3
5,429,578	-				-0.5
5,429,585	+				+0.7
5,429,585	+				+0.4
5,429,586	-				-1.9
5,429,586	-				-0.4
5,429,598	-				-1.1
5,429,599	+				+0.4
5,429,599	+				+2.6
5,429,599	+				+0.1
5,429,600	-				+1.7
5,429,600	-				+2.0
5,429,600	-				+1.1
5,429,604	+				-0.2
5,429,605	-				-2.0
5,429,605	-				-0.2
5,429,605	-				-0.0
5,429,607	-				+0.5
5,429,619	-				+1.5
5,429,626	+				-3.5
5,429,627	-				+0.1
5,429,629	-				-1.0
5,429,640	-				+0.1
5,429,697	+				+1.3
5,429,698	-				+0.3
5,429,708	-				-1.7
5,429,783	+				-1.0
5,429,784	-				+0.6
5,429,816	+				-1.0
5,429,816	+				-0.8
5,429,816	+				+1.8
5,429,817	-				+2.5
5,429,817	-				+0.3
5,429,817	-				+1.3
5,429,831	+		Pf6N2E2_4696	0.12	+1.6
5,429,831	+		Pf6N2E2_4696	0.12	-3.8
5,429,832	-		Pf6N2E2_4696	0.12	+1.0
5,429,832	-		Pf6N2E2_4696	0.12	+0.6
5,429,832	-		Pf6N2E2_4696	0.12	+0.8
5,429,832	-		Pf6N2E2_4696	0.12	+0.6
5,429,832	-		Pf6N2E2_4696	0.12	+0.4
5,430,041	-		Pf6N2E2_4696	0.62	+0.2
5,430,237	-				+1.1
5,430,329	+				+1.3
5,430,329	+				+1.0
5,430,329	+				+1.7
5,430,330	-				+1.3
5,430,330	-				-0.7
5,430,380	+		Pf6N2E2_4697	0.12	-0.1
5,430,380	+		Pf6N2E2_4697	0.12	+2.4
5,430,380	+		Pf6N2E2_4697	0.12	+0.4
5,430,380	+		Pf6N2E2_4697	0.12	-1.9
5,430,380	+		Pf6N2E2_4697	0.12	-2.9
5,430,380	+		Pf6N2E2_4697	0.12	+0.5
5,430,381	-		Pf6N2E2_4697	0.12	-1.7
5,430,381	-		Pf6N2E2_4697	0.12	-2.2
5,430,441	+		Pf6N2E2_4697	0.20	+0.1
5,430,442	-		Pf6N2E2_4697	0.20	-1.1
5,430,503	+		Pf6N2E2_4697	0.28	+1.3
5,430,503	+		Pf6N2E2_4697	0.28	+1.7
5,430,504	-		Pf6N2E2_4697	0.28	+1.3
5,430,504	-		Pf6N2E2_4697	0.28	-1.7
5,430,504	-		Pf6N2E2_4697	0.28	+1.2
5,430,504	-		Pf6N2E2_4697	0.28	+0.6
5,430,504	-		Pf6N2E2_4697	0.28	+0.5
5,430,504	-		Pf6N2E2_4697	0.28	+0.9
5,430,556	-		Pf6N2E2_4697	0.35	-1.0
5,430,716	+		Pf6N2E2_4697	0.55	+1.6
5,430,716	+		Pf6N2E2_4697	0.55	-2.6
5,430,716	+		Pf6N2E2_4697	0.55	-2.8
5,430,717	-		Pf6N2E2_4697	0.55	-1.5
5,430,737	+		Pf6N2E2_4697	0.58	+1.3
5,430,737	+		Pf6N2E2_4697	0.58	+1.0
5,430,737	+		Pf6N2E2_4697	0.58	+2.1
5,430,738	-		Pf6N2E2_4697	0.58	-3.1
5,430,738	-		Pf6N2E2_4697	0.58	+0.0
5,430,738	-		Pf6N2E2_4697	0.58	+1.0
5,430,738	-		Pf6N2E2_4697	0.58	-0.0
5,430,879	+		Pf6N2E2_4697	0.76	-1.6
5,430,879	+		Pf6N2E2_4697	0.76	+1.0
5,430,880	-		Pf6N2E2_4697	0.76	-1.3
5,430,880	-		Pf6N2E2_4697	0.76	+2.3
5,430,922	+		Pf6N2E2_4697	0.82	+3.3
5,430,922	+		Pf6N2E2_4697	0.82	+0.4
5,430,922	+		Pf6N2E2_4697	0.82	+1.1
5,430,922	+		Pf6N2E2_4697	0.82	+0.4
5,430,923	-		Pf6N2E2_4697	0.82	-3.0
5,430,923	-		Pf6N2E2_4697	0.82	-0.5
5,430,923	-		Pf6N2E2_4697	0.82	-0.1
5,430,923	-		Pf6N2E2_4697	0.82	-2.4
5,430,923	-		Pf6N2E2_4697	0.82	+1.2
5,430,923	-		Pf6N2E2_4697	0.82	+1.0
5,431,017	+				-0.2
5,431,023	+				+0.7
5,431,024	-				+0.9
5,431,024	-				-1.3
5,431,024	-				-3.0
5,431,027	+				+0.5
5,431,027	+				-3.8
5,431,028	-				-0.5
5,431,028	-				-0.2
5,431,034	+				+0.4
5,431,034	+				+1.5
5,431,034	+				+2.1
5,431,035	-				-0.8
5,431,035	-				+0.5
5,431,035	-				-0.6
5,431,035	-				+1.3
5,431,035	-				-2.5
5,431,035	-				-2.8
5,431,036	+				-2.3
5,431,036	+				+0.8
5,431,036	+				+2.3
5,431,036	+				-2.7
5,431,037	-				-2.4
5,431,037	-				-1.7
5,431,037	-				+1.7
5,431,037	-				+2.8
5,431,037	-				-2.6
5,431,037	-				-0.4
5,431,062	+				+1.5
5,431,062	+				+0.5
5,431,062	+				+1.4
5,431,062	+				+0.8
5,431,063	-				+1.2
5,431,063	-				-1.1
5,431,063	-				-1.0
5,431,078	+				-1.2
5,431,079	-				-3.7
5,431,086	-				-1.7
5,431,124	+				-0.1
5,431,125	-				+1.5
5,431,125	-				-0.8
5,431,148	-				+1.9
5,431,160	-				+0.9
5,431,160	-				-1.3
5,431,160	-				-2.5
5,431,176	+				+1.9
5,431,176	+				+0.7
5,431,176	+				+2.1
5,431,176	+				-1.5
5,431,176	+				+1.1
5,431,177	-				+0.4
5,431,177	-				-1.2
5,431,177	-				-1.5