Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4692

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,424,142	+		Pf6N2E2_4690	0.18	+1.4
5,424,142	+		Pf6N2E2_4690	0.18	+0.7
5,424,142	+		Pf6N2E2_4690	0.18	-0.8
5,424,143	-		Pf6N2E2_4690	0.19	-0.1
5,424,143	-		Pf6N2E2_4690	0.19	-2.1
5,424,220	+		Pf6N2E2_4690	0.27	+0.9
5,424,220	+		Pf6N2E2_4690	0.27	+1.6
5,424,220	+		Pf6N2E2_4690	0.27	+2.2
5,424,221	-		Pf6N2E2_4690	0.27	+1.8
5,424,221	-		Pf6N2E2_4690	0.27	+2.6
5,424,221	-		Pf6N2E2_4690	0.27	+1.1
5,424,415	+		Pf6N2E2_4690	0.47	-1.6
5,424,416	-		Pf6N2E2_4690	0.47	-2.8
5,424,416	-		Pf6N2E2_4690	0.47	+0.7
5,424,416	-		Pf6N2E2_4690	0.47	+1.2
5,424,490	+		Pf6N2E2_4690	0.54	-1.4
5,424,491	-		Pf6N2E2_4690	0.55	+1.6
5,424,547	+		Pf6N2E2_4690	0.60	+0.4
5,424,548	-		Pf6N2E2_4690	0.60	-1.4
5,424,575	+		Pf6N2E2_4690	0.63	-1.5
5,424,575	+		Pf6N2E2_4690	0.63	-1.3
5,424,831	-		Pf6N2E2_4690	0.90	+1.5
5,424,880	-				-0.1
5,424,880	-				-2.1
5,424,921	-				+1.3
5,425,016	+		Pf6N2E2_4691	0.57	-0.6
5,425,016	+		Pf6N2E2_4691	0.57	-3.2
5,425,099	+				-2.4
5,425,099	+				-0.4
5,425,100	-				-1.7
5,425,100	-				-0.7
5,425,100	-				+0.7
5,425,100	-				-0.4
5,425,226	+		Pf6N2E2_4692	0.13	-0.6
5,425,226	+		Pf6N2E2_4692	0.13	-2.1
5,425,226	+		Pf6N2E2_4692	0.13	+0.1
5,425,227	-		Pf6N2E2_4692	0.13	-1.8
5,425,227	-		Pf6N2E2_4692	0.13	+0.6
5,425,572	+		Pf6N2E2_4692	0.52	+1.4
5,425,572	+		Pf6N2E2_4692	0.52	-1.8
5,425,572	+		Pf6N2E2_4692	0.52	+0.5
5,425,572	+		Pf6N2E2_4692	0.52	+1.2
5,425,572	+		Pf6N2E2_4692	0.52	+1.6
5,425,572	+		Pf6N2E2_4692	0.52	-1.8
5,425,572	+		Pf6N2E2_4692	0.52	-3.4
5,425,572	+		Pf6N2E2_4692	0.52	+0.2
5,425,572	+		Pf6N2E2_4692	0.52	+2.8
5,425,573	-		Pf6N2E2_4692	0.52	-0.8
5,425,573	-		Pf6N2E2_4692	0.52	-0.8
5,425,573	-		Pf6N2E2_4692	0.52	-4.3
5,425,573	-		Pf6N2E2_4692	0.52	+0.3
5,425,573	-		Pf6N2E2_4692	0.52	-2.9
5,425,573	-		Pf6N2E2_4692	0.52	-2.9
5,425,573	-		Pf6N2E2_4692	0.52	-2.2
5,425,804	-		Pf6N2E2_4692	0.78	-0.7
5,426,020	+				-1.1
5,426,020	+				+0.8
5,426,020	+				+0.8
5,426,021	-				+0.3
5,426,073	+				+2.1
5,426,118	+				-2.6
5,426,118	+				+1.5
5,426,118	+				-0.5
5,426,118	+				-0.6
5,426,119	-				+1.3
5,426,119	-				-1.2
5,426,366	+		Pf6N2E2_4693	0.32	+1.8
5,426,366	+		Pf6N2E2_4693	0.32	-2.4
5,426,367	-		Pf6N2E2_4693	0.32	-1.2
5,426,570	+		Pf6N2E2_4693	0.53	-0.8
5,426,570	+		Pf6N2E2_4693	0.53	-2.2
5,426,570	+		Pf6N2E2_4693	0.53	-2.0
5,426,570	+		Pf6N2E2_4693	0.53	-1.2
5,426,570	+		Pf6N2E2_4693	0.53	-0.6
5,426,571	-		Pf6N2E2_4693	0.53	-0.5
5,426,571	-		Pf6N2E2_4693	0.53	+0.1
5,426,642	+		Pf6N2E2_4693	0.61	-0.2
5,426,642	+		Pf6N2E2_4693	0.61	+1.7
5,426,642	+		Pf6N2E2_4693	0.61	+1.8
5,426,643	-		Pf6N2E2_4693	0.61	-0.8
5,426,837	+		Pf6N2E2_4693	0.81	-0.4
5,426,986	+				-2.8
5,426,986	+				-1.7
5,426,987	-				-2.0
5,426,987	-				-1.8
5,426,987	-				+0.1
5,426,987	-				+2.3