Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4681

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,413,986	+		Pf6N2E2_4680	0.35	-2.5
5,413,987	-		Pf6N2E2_4680	0.36	-0.1
5,414,388	+				-0.9
5,414,388	+				-2.0
5,414,388	+				+0.5
5,414,388	+				-2.1
5,414,388	+				-0.8
5,414,388	+				+1.0
5,414,388	+				+1.3
5,414,389	-				+0.1
5,414,389	-				-1.8
5,414,389	-				+0.8
5,414,389	-				-0.6
5,414,389	-				-1.7
5,414,389	-				+0.1
5,414,389	-				-2.5
5,414,389	-				+2.2
5,414,389	-				-0.3
5,414,389	-				-1.1
5,414,389	-				+1.0
5,414,401	+				-3.0
5,414,402	-				-1.2
5,414,448	+				+1.1
5,414,449	-				+1.2
5,414,491	+				+2.5
5,414,491	+				-2.4
5,414,529	+				-0.5
5,414,529	+				+1.3
5,414,529	+				-2.3
5,414,530	-				+1.0
5,414,530	-				-0.7
5,414,594	+				-0.3
5,414,594	+				-0.3
5,414,594	+				-1.3
5,414,595	-				-1.6
5,414,595	-				+2.2
5,414,595	-				-0.0
5,414,595	-				+0.4
5,414,595	-				+0.6
5,414,596	+				-2.4
5,414,596	+				-1.5
5,414,596	+				-2.2
5,414,596	+				-2.4
5,414,596	+				-0.1
5,414,596	+				-2.4
5,414,596	+				+0.0
5,414,596	+				-0.6
5,414,597	-				-1.6
5,414,597	-				-3.5
5,414,597	-				-0.5
5,414,623	-				+0.4
5,414,636	-				+2.9
5,414,645	-				-2.5
5,414,645	-				+2.3
5,414,645	-				+2.1
5,414,645	-				+1.4
5,414,665	+				-3.0
5,414,665	+				-0.1
5,414,666	-				+2.2
5,414,788	+				-0.3
5,414,788	+				+1.8
5,414,789	-				-2.9
5,414,789	-				-1.7
5,414,789	-				-0.7
5,414,789	-				-0.0
5,414,811	-				+1.6
5,414,818	-				+1.9
5,414,818	-				+1.8
5,414,824	+				-0.6
5,414,824	+				+0.7
5,414,825	-				+2.3
5,414,825	-				+1.8
5,414,900	+				-1.5
5,414,901	-				+1.7
5,414,930	+				+1.3
5,415,290	+		Pf6N2E2_4681	0.33	+1.2
5,415,290	+		Pf6N2E2_4681	0.33	-2.6
5,415,290	+		Pf6N2E2_4681	0.33	-0.9
5,415,290	+		Pf6N2E2_4681	0.33	-3.5
5,415,290	+		Pf6N2E2_4681	0.33	-3.1
5,415,290	+		Pf6N2E2_4681	0.33	+0.3
5,415,290	+		Pf6N2E2_4681	0.33	+0.4
5,415,290	+		Pf6N2E2_4681	0.33	+1.9
5,415,291	-		Pf6N2E2_4681	0.33	+1.4
5,415,291	-		Pf6N2E2_4681	0.33	+0.5
5,415,291	-		Pf6N2E2_4681	0.33	+1.4
5,415,332	+		Pf6N2E2_4681	0.37	+0.7
5,415,333	-		Pf6N2E2_4681	0.37	+1.6
5,415,883	-		Pf6N2E2_4681	0.83	-2.9
5,415,883	-		Pf6N2E2_4681	0.83	+2.2
5,416,044	+				+2.3
5,416,044	+				-1.3
5,416,044	+				+0.6
5,416,045	-				+2.0
5,416,045	-				+1.9
5,416,089	+				+0.9
5,416,089	+				+1.9
5,416,094	+				-2.1
5,416,094	+				+1.0
5,416,095	-				+3.3
5,416,140	+				+0.3
5,416,140	+				+1.1
5,416,140	+				-1.5
5,416,140	+				+0.6
5,416,141	-				-0.3
5,416,141	-				-1.9
5,416,281	-		Pf6N2E2_4682	0.24	-0.8
5,416,402	+		Pf6N2E2_4682	0.39	-0.5
5,416,402	+		Pf6N2E2_4682	0.39	+1.1
5,416,403	-		Pf6N2E2_4682	0.39	-1.5
5,416,499	-		Pf6N2E2_4682	0.50	+1.0
5,416,499	-		Pf6N2E2_4682	0.50	-0.3
5,416,552	+		Pf6N2E2_4682	0.57	+2.2
5,416,553	-		Pf6N2E2_4682	0.57	-0.5
5,416,553	-		Pf6N2E2_4682	0.57	-2.4
5,416,603	-		Pf6N2E2_4682	0.63	-1.0
5,416,701	+		Pf6N2E2_4682	0.74	+0.7
5,416,886	-				+2.0
5,416,899	+				-0.1
5,416,900	-				+1.8
5,416,913	+				+1.4
5,416,913	+				-0.5
5,416,913	+				+2.3
5,416,914	-				-3.1
5,416,914	-				+2.3
5,416,914	-				-0.9
5,416,914	-				+0.6
5,416,922	+				-0.2
5,416,922	+				+4.0
5,416,922	+				+2.0
5,416,947	+				-1.5
5,416,947	+				-0.1
5,416,947	+				+1.4
5,416,948	-				+2.1
5,416,948	-				-3.2
5,416,979	+				-0.7
5,416,979	+				-0.3
5,416,979	+				+2.8
5,416,979	+				+0.3
5,416,979	+				+2.7
5,416,979	+				+0.6
5,416,979	+				-2.4
5,416,980	-				+1.8
5,416,980	-				-0.3
5,416,980	-				+1.7
5,416,980	-				-0.9
5,416,980	-				-2.2
5,416,992	+				+1.2
5,416,992	+				-0.8
5,416,992	+				+1.9
5,417,033	-				+1.4
5,417,065	+				+2.7
5,417,072	+				+0.2
5,417,073	-				+0.1
5,417,073	-				+0.6
5,417,073	-				-0.3