Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4556

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,284,458	-		Pf6N2E2_4555	0.11	-0.1
5,284,458	-		Pf6N2E2_4555	0.11	+1.7
5,284,520	+		Pf6N2E2_4555	0.17	+1.2
5,284,520	+		Pf6N2E2_4555	0.17	+1.2
5,284,587	-		Pf6N2E2_4555	0.24	-2.5
5,284,589	+		Pf6N2E2_4555	0.24	+1.1
5,284,589	+		Pf6N2E2_4555	0.24	+0.8
5,284,590	-		Pf6N2E2_4555	0.24	-0.3
5,284,721	+		Pf6N2E2_4555	0.38	+2.8
5,284,925	+		Pf6N2E2_4555	0.60	-0.2
5,284,925	+		Pf6N2E2_4555	0.60	+1.1
5,284,926	-		Pf6N2E2_4555	0.60	+0.4
5,284,926	-		Pf6N2E2_4555	0.60	+1.0
5,284,926	-		Pf6N2E2_4555	0.60	-0.8
5,284,926	-		Pf6N2E2_4555	0.60	-0.4
5,284,926	-		Pf6N2E2_4555	0.60	+1.9
5,284,926	-		Pf6N2E2_4555	0.60	+2.8
5,284,928	+		Pf6N2E2_4555	0.60	+1.9
5,284,928	+		Pf6N2E2_4555	0.60	+1.0
5,284,928	+		Pf6N2E2_4555	0.60	-0.3
5,284,928	+		Pf6N2E2_4555	0.60	+0.5
5,284,929	-		Pf6N2E2_4555	0.60	+2.2
5,284,929	-		Pf6N2E2_4555	0.60	-1.8
5,284,929	-		Pf6N2E2_4555	0.60	+2.1
5,285,032	-		Pf6N2E2_4555	0.71	-2.1
5,285,081	-		Pf6N2E2_4555	0.76	-0.6
5,285,081	-		Pf6N2E2_4555	0.76	+1.4
5,285,313	-				-2.4
5,285,313	-				+0.4
5,285,347	-				-2.1
5,285,347	-				+1.4
5,285,403	+				-2.6
5,285,404	-				+0.9
5,285,463	+				-2.6
5,285,466	+				-2.1
5,285,466	+				-2.4
5,285,467	-				-2.4
5,285,467	-				-1.7
5,285,467	-				+1.1
5,285,467	-				+0.2
5,285,541	+		Pf6N2E2_4556	0.19	-1.5
5,285,541	+		Pf6N2E2_4556	0.19	-2.8
5,285,541	+		Pf6N2E2_4556	0.19	-2.9
5,285,542	-		Pf6N2E2_4556	0.19	-2.4
5,285,542	-		Pf6N2E2_4556	0.19	-0.5
5,285,542	-		Pf6N2E2_4556	0.19	-2.5
5,286,004	-		Pf6N2E2_4556	0.81	-3.4
5,286,072	+				-2.2
5,286,072	+				-2.8
5,286,072	+				-1.8
5,286,072	+				-1.7
5,286,073	-				+0.9
5,286,073	-				+0.8
5,286,073	-				-1.0
5,286,073	-				-0.8
5,286,084	+				+0.8
5,286,085	-				-1.7
5,286,085	-				-1.1
5,286,085	-				-2.2
5,286,085	-				-3.4
5,286,085	-				-1.2
5,286,170	-				-0.4
5,286,170	-				-3.8
5,286,170	-				+0.9
5,286,207	-				+1.7
5,286,228	+				+1.0
5,286,229	-				-1.1
5,286,229	-				+0.4
5,286,283	+				-1.4
5,286,283	+				+1.5
5,286,283	+				-0.4
5,286,283	+				+1.9
5,286,283	+				-1.9
5,286,283	+				-1.0
5,286,283	+				+0.0
5,286,283	+				-1.6
5,286,283	+				-0.7
5,286,284	-				-1.8
5,286,284	-				+0.1
5,286,284	-				+0.4
5,286,284	-				+0.8
5,286,284	-				+3.0
5,286,284	-				+1.9
5,286,284	-				+0.6
5,286,284	-				-0.6
5,286,284	-				+0.9
5,286,284	-				+0.3
5,286,286	+				+0.8
5,286,287	-				+0.9
5,286,287	-				+1.5
5,286,287	-				+1.0
5,286,287	-				+2.0
5,286,287	-				-2.0
5,286,303	+				-0.5
5,286,303	+				-0.8
5,286,304	-				-0.4
5,286,304	-				+0.8
5,286,304	-				+1.5
5,286,304	-				+0.6
5,286,304	-				-3.3
5,286,304	-				+2.3
5,286,327	+				+0.4
5,286,328	-				+0.0
5,286,328	-				-2.7
5,286,332	-				-0.3
5,286,551	+		Pf6N2E2_4557	0.42	+0.9
5,286,551	+		Pf6N2E2_4557	0.42	-1.7
5,286,552	-		Pf6N2E2_4557	0.42	+1.9
5,286,552	-		Pf6N2E2_4557	0.42	+0.8
5,286,552	-		Pf6N2E2_4557	0.42	+1.4
5,286,657	-		Pf6N2E2_4557	0.58	+0.3
5,286,657	-		Pf6N2E2_4557	0.58	-0.7
5,286,716	+		Pf6N2E2_4557	0.68	-2.4
5,286,716	+		Pf6N2E2_4557	0.68	+1.5
5,286,717	-		Pf6N2E2_4557	0.68	+0.6
5,286,717	-		Pf6N2E2_4557	0.68	+1.2
5,286,717	-		Pf6N2E2_4557	0.68	-1.6
5,286,717	-		Pf6N2E2_4557	0.68	-1.5
5,286,717	-		Pf6N2E2_4557	0.68	-0.0
5,286,764	+		Pf6N2E2_4557	0.75	-0.6
5,286,764	+		Pf6N2E2_4557	0.75	+0.8
5,286,764	+		Pf6N2E2_4557	0.75	+0.4
5,286,764	+		Pf6N2E2_4557	0.75	-0.3
5,286,765	-		Pf6N2E2_4557	0.76	-2.8
5,286,765	-		Pf6N2E2_4557	0.76	+0.4
5,286,765	-		Pf6N2E2_4557	0.76	-1.8