Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4408

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,140,685	-		Pf6N2E2_4406	0.74	-0.2
5,140,685	-		Pf6N2E2_4406	0.74	+1.1
5,140,685	-		Pf6N2E2_4406	0.74	+1.2
5,140,705	+		Pf6N2E2_4406	0.75	-3.4
5,140,705	+		Pf6N2E2_4406	0.75	-0.7
5,140,705	+		Pf6N2E2_4406	0.75	+2.5
5,140,705	+		Pf6N2E2_4406	0.75	-1.0
5,140,705	+		Pf6N2E2_4406	0.75	+0.8
5,140,706	-		Pf6N2E2_4406	0.75	+1.5
5,140,706	-		Pf6N2E2_4406	0.75	+2.0
5,140,823	-		Pf6N2E2_4406	0.82	-2.5
5,140,834	+		Pf6N2E2_4406	0.83	-0.2
5,140,834	+		Pf6N2E2_4406	0.83	-2.1
5,140,835	-				+1.4
5,140,861	+		Pf6N2E2_4406	0.84	-0.8
5,140,870	+		Pf6N2E2_4406	0.85	+1.2
5,140,870	+		Pf6N2E2_4406	0.85	-2.9
5,140,870	+		Pf6N2E2_4406	0.85	+1.3
5,140,870	+		Pf6N2E2_4406	0.85	+0.2
5,140,871	-		Pf6N2E2_4406	0.85	+1.6
5,140,871	-		Pf6N2E2_4406	0.85	-2.8
5,140,871	-		Pf6N2E2_4406	0.85	+2.7
5,140,871	-		Pf6N2E2_4406	0.85	+1.5
5,141,098	+				+0.9
5,141,098	+				-0.5
5,141,098	+				-0.4
5,141,098	+				+0.1
5,141,099	-				+0.8
5,141,099	-				-0.6
5,141,099	-				-0.5
5,141,114	+				-0.4
5,141,114	+				+2.5
5,141,115	-				-1.1
5,141,115	-				+0.9
5,141,115	-				-1.0
5,141,115	-				-0.4
5,141,172	+		Pf6N2E2_4407	0.11	+1.6
5,141,172	+		Pf6N2E2_4407	0.11	-1.2
5,141,172	+		Pf6N2E2_4407	0.11	+1.4
5,141,208	+		Pf6N2E2_4407	0.18	-1.4
5,141,208	+		Pf6N2E2_4407	0.18	-2.4
5,141,209	-		Pf6N2E2_4407	0.18	-0.4
5,141,209	-		Pf6N2E2_4407	0.18	+0.1
5,141,272	-		Pf6N2E2_4407	0.29	-3.0
5,141,272	-		Pf6N2E2_4407	0.29	-3.0
5,141,337	+		Pf6N2E2_4407	0.41	-2.3
5,141,337	+		Pf6N2E2_4407	0.41	-0.7
5,141,337	+		Pf6N2E2_4407	0.41	-0.2
5,141,338	-		Pf6N2E2_4407	0.41	-0.9
5,141,338	-		Pf6N2E2_4407	0.41	+0.3
5,141,433	+		Pf6N2E2_4407	0.59	-0.1
5,141,437	-		Pf6N2E2_4407	0.59	-3.2
5,141,612	-				+0.2
5,141,700	+				+0.4
5,141,700	+				+1.6
5,141,701	-				+1.4
5,141,701	-				-2.0
5,141,751	+				+1.8
5,141,751	+				+0.2
5,141,795	+				+1.8
5,141,796	-				+1.6
5,141,856	+		Pf6N2E2_4408	0.14	+1.3
5,141,856	+		Pf6N2E2_4408	0.14	-1.3
5,141,856	+		Pf6N2E2_4408	0.14	-1.4
5,141,856	+		Pf6N2E2_4408	0.14	+2.0
5,141,856	+		Pf6N2E2_4408	0.14	+1.2
5,141,857	-		Pf6N2E2_4408	0.14	+0.0
5,141,857	-		Pf6N2E2_4408	0.14	+2.8
5,141,857	-		Pf6N2E2_4408	0.14	+0.9
5,141,857	-		Pf6N2E2_4408	0.14	-2.5
5,141,857	-		Pf6N2E2_4408	0.14	+0.6
5,141,857	-		Pf6N2E2_4408	0.14	-2.4
5,141,857	-		Pf6N2E2_4408	0.14	+0.1
5,141,857	-		Pf6N2E2_4408	0.14	+2.4
5,141,857	-		Pf6N2E2_4408	0.14	+0.9
5,141,857	-		Pf6N2E2_4408	0.14	+0.8
5,141,857	-		Pf6N2E2_4408	0.14	+1.5
5,141,857	-		Pf6N2E2_4408	0.14	+0.7
5,141,857	-		Pf6N2E2_4408	0.14	+0.1
5,141,857	-		Pf6N2E2_4408	0.14	-2.5
5,141,967	+		Pf6N2E2_4408	0.21	-3.1
5,141,968	-		Pf6N2E2_4408	0.21	+0.0
5,142,247	-		Pf6N2E2_4408	0.41	-0.6
5,142,247	-		Pf6N2E2_4408	0.41	-1.6
5,142,247	-		Pf6N2E2_4408	0.41	-1.6
5,142,394	-		Pf6N2E2_4408	0.51	+2.5
5,142,501	+		Pf6N2E2_4408	0.59	-1.0
5,142,502	-		Pf6N2E2_4408	0.59	-1.5
5,142,502	-		Pf6N2E2_4408	0.59	+0.7
5,142,502	-		Pf6N2E2_4408	0.59	+0.0
5,142,666	+		Pf6N2E2_4408	0.70	+2.0
5,142,666	+		Pf6N2E2_4408	0.70	-2.2
5,142,666	+		Pf6N2E2_4408	0.70	-0.9
5,142,667	-		Pf6N2E2_4408	0.70	-0.2
5,142,667	-		Pf6N2E2_4408	0.70	+1.7
5,142,667	-		Pf6N2E2_4408	0.70	+0.6
5,142,667	-		Pf6N2E2_4408	0.70	+1.6
5,142,667	-		Pf6N2E2_4408	0.70	-1.3
5,142,672	+		Pf6N2E2_4408	0.71	+1.5
5,142,673	-		Pf6N2E2_4408	0.71	+1.8
5,142,709	-		Pf6N2E2_4408	0.73	+2.4
5,142,717	+		Pf6N2E2_4408	0.74	-1.0
5,142,717	+		Pf6N2E2_4408	0.74	+1.8
5,142,717	+		Pf6N2E2_4408	0.74	+0.4
5,142,718	-		Pf6N2E2_4408	0.74	+1.9
5,142,795	+		Pf6N2E2_4408	0.79	+1.9
5,142,795	+		Pf6N2E2_4408	0.79	-0.2
5,142,795	+		Pf6N2E2_4408	0.79	+0.4
5,142,796	-		Pf6N2E2_4408	0.80	+1.7
5,142,796	-		Pf6N2E2_4408	0.80	-2.9
5,142,796	-		Pf6N2E2_4408	0.80	-0.6
5,142,796	-		Pf6N2E2_4408	0.80	-2.0
5,142,840	+		Pf6N2E2_4408	0.83	-2.3
5,142,840	+		Pf6N2E2_4408	0.83	+1.6
5,142,840	+		Pf6N2E2_4408	0.83	-1.1
5,142,840	+		Pf6N2E2_4408	0.83	+0.7
5,142,840	+		Pf6N2E2_4408	0.83	+0.6
5,142,840	+		Pf6N2E2_4408	0.83	-0.3
5,142,840	+		Pf6N2E2_4408	0.83	+0.3
5,142,841	-		Pf6N2E2_4408	0.83	-1.7
5,142,841	-		Pf6N2E2_4408	0.83	+2.0
5,142,841	-		Pf6N2E2_4408	0.83	+1.7
5,142,904	+		Pf6N2E2_4408	0.87	-2.0
5,142,904	+		Pf6N2E2_4408	0.87	+0.0
5,142,904	+		Pf6N2E2_4408	0.87	-1.2
5,143,024	+				-3.0
5,143,025	-				-2.6
5,143,025	-				+1.7
5,143,083	+				-0.5
5,143,083	+				-0.5
5,143,084	-				+1.5
5,143,241	-				-1.5
5,143,249	+				+1.1
5,143,249	+				+1.2
5,143,249	+				-1.1
5,143,250	-				-0.8
5,143,282	+				-1.6
5,143,573	-				-1.3
5,143,573	-				+0.8
5,143,573	-				+0.5
5,143,615	-				-0.2
5,143,711	+		Pf6N2E2_4409	0.12	+0.3
5,143,757	+		Pf6N2E2_4409	0.15	-0.7
5,143,757	+		Pf6N2E2_4409	0.15	+2.4
5,143,757	+		Pf6N2E2_4409	0.15	-0.7
5,143,757	+		Pf6N2E2_4409	0.15	+1.3
5,143,757	+		Pf6N2E2_4409	0.15	-2.9
5,143,757	+		Pf6N2E2_4409	0.15	+0.2
5,143,757	+		Pf6N2E2_4409	0.15	-1.2
5,143,758	-		Pf6N2E2_4409	0.15	+1.8
5,143,758	-		Pf6N2E2_4409	0.15	-1.8
5,143,766	+		Pf6N2E2_4409	0.16	+0.6
5,143,766	+		Pf6N2E2_4409	0.16	+0.0
5,143,766	+		Pf6N2E2_4409	0.16	-4.0
5,143,766	+		Pf6N2E2_4409	0.16	-2.8
5,143,766	+		Pf6N2E2_4409	0.16	+0.6
5,143,766	+		Pf6N2E2_4409	0.16	+1.8
5,143,766	+		Pf6N2E2_4409	0.16	+1.2
5,143,766	+		Pf6N2E2_4409	0.16	-0.2
5,143,766	+		Pf6N2E2_4409	0.16	+1.2
5,143,767	-		Pf6N2E2_4409	0.16	-2.5
5,143,767	-		Pf6N2E2_4409	0.16	+0.7
5,143,767	-		Pf6N2E2_4409	0.16	+0.8
5,143,767	-		Pf6N2E2_4409	0.16	-0.7
5,143,767	-		Pf6N2E2_4409	0.16	-1.5
5,143,935	-		Pf6N2E2_4409	0.26	-2.4
5,143,935	-		Pf6N2E2_4409	0.26	-2.7
5,144,027	+		Pf6N2E2_4409	0.31	-0.5