Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4371

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
5,098,715	+		Pf6N2E2_4369	0.79	-1.2
5,098,724	+		Pf6N2E2_4369	0.80	-0.8
5,098,724	+		Pf6N2E2_4369	0.80	-1.2
5,098,725	-		Pf6N2E2_4369	0.80	+0.1
5,098,725	-		Pf6N2E2_4369	0.80	-0.2
5,098,881	+				-1.3
5,098,882	-				+0.4
5,098,882	-				+0.8
5,098,908	+				-1.1
5,098,909	-				+1.5
5,098,929	-				+0.8
5,098,932	+				-1.8
5,098,936	+				-3.3
5,098,936	+				+0.8
5,098,947	+				-0.8
5,099,061	+				+0.4
5,099,178	+		Pf6N2E2_4370	0.33	+0.4
5,099,587	-				+1.6
5,099,641	+				-1.0
5,099,641	+				-0.8
5,099,681	+				-0.9
5,099,681	+				-1.9
5,099,681	+				+1.8
5,099,682	-				+1.0
5,099,769	-		Pf6N2E2_4371	0.37	+1.4
5,099,785	-		Pf6N2E2_4371	0.42	+0.8
5,099,896	-		Pf6N2E2_4371	0.77	-2.0
5,099,899	+		Pf6N2E2_4371	0.78	+0.0
5,099,899	+		Pf6N2E2_4371	0.78	-2.0
5,099,899	+		Pf6N2E2_4371	0.78	-2.5
5,099,900	-		Pf6N2E2_4371	0.78	-0.0
5,099,910	+		Pf6N2E2_4371	0.81	-0.9
5,099,910	+		Pf6N2E2_4371	0.81	-2.4
5,099,910	+		Pf6N2E2_4371	0.81	-1.7
5,099,910	+		Pf6N2E2_4371	0.81	-2.1
5,099,910	+		Pf6N2E2_4371	0.81	+0.1
5,099,911	-		Pf6N2E2_4371	0.82	-3.0
5,099,911	-		Pf6N2E2_4371	0.82	+0.8
5,099,911	-		Pf6N2E2_4371	0.82	+1.7
5,099,911	-		Pf6N2E2_4371	0.82	-1.2
5,099,911	-		Pf6N2E2_4371	0.82	+0.8
5,099,913	+		Pf6N2E2_4371	0.82	-2.8
5,099,913	+		Pf6N2E2_4371	0.82	+0.8
5,099,913	+		Pf6N2E2_4371	0.82	-1.4
5,099,913	+		Pf6N2E2_4371	0.82	-1.4
5,099,913	+		Pf6N2E2_4371	0.82	-0.4
5,099,913	+		Pf6N2E2_4371	0.82	-2.0
5,099,913	+		Pf6N2E2_4371	0.82	-2.3
5,099,913	+		Pf6N2E2_4371	0.82	+0.6
5,099,913	+		Pf6N2E2_4371	0.82	+1.0
5,099,913	+		Pf6N2E2_4371	0.82	-1.4
5,099,913	+		Pf6N2E2_4371	0.82	-0.5
5,099,913	+		Pf6N2E2_4371	0.82	+0.7
5,099,914	-		Pf6N2E2_4371	0.83	+0.5
5,099,914	-		Pf6N2E2_4371	0.83	-3.2
5,099,914	-		Pf6N2E2_4371	0.83	+1.9
5,099,914	-		Pf6N2E2_4371	0.83	+1.4
5,099,914	-		Pf6N2E2_4371	0.83	+0.2
5,099,914	-		Pf6N2E2_4371	0.83	+1.9
5,099,914	-		Pf6N2E2_4371	0.83	-1.8
5,099,914	-		Pf6N2E2_4371	0.83	+1.6
5,099,914	-		Pf6N2E2_4371	0.83	+0.8
5,099,914	-		Pf6N2E2_4371	0.83	-2.1
5,099,938	+				+0.8
5,099,938	+				-2.6
5,099,938	+				-2.5
5,099,938	+				+1.5
5,099,939	-				+1.7
5,099,939	-				+0.5
5,099,939	-				+0.5
5,099,939	-				+1.2
5,099,939	-				-0.6
5,099,939	-				-0.0
5,099,939	-				-2.8
5,099,939	-				+1.4
5,099,939	-				+1.1
5,099,939	-				+2.0
5,099,951	-				-2.0
5,099,959	-				+1.8
5,099,987	-				+0.4
5,100,057	+				+1.1
5,100,058	-				-0.9
5,100,116	-				+0.6
5,100,124	+				-3.5
5,100,125	-				+2.2
5,100,176	+				-1.4
5,100,176	+				-0.8
5,100,177	-				-2.7
5,100,230	+				+1.4
5,100,230	+				+0.8
5,100,230	+				-2.6
5,100,231	-				+1.3
5,100,231	-				-2.9
5,100,231	-				-2.1
5,100,231	-				-0.8
5,100,231	-				+0.1
5,100,231	-				+3.2
5,100,249	+				+0.3
5,100,249	+				-2.3
5,100,250	-				-2.8
5,100,314	+				-2.3
5,100,314	+				+0.7
5,100,314	+				+1.4
5,100,337	+				-1.6
5,100,338	-				-0.4
5,100,338	-				+0.9
5,100,358	+				+3.0
5,100,358	+				-1.3
5,100,359	-				-2.4
5,100,467	-				+0.3
5,100,467	-				-2.0
5,100,473	-				-0.2
5,100,473	-				-0.8
5,100,480	+				-2.8
5,100,480	+				+0.9
5,100,593	+				+0.3
5,100,715	+		Pf6N2E2_4372	0.16	-0.1
5,100,755	+		Pf6N2E2_4372	0.20	+0.2
5,100,761	+		Pf6N2E2_4372	0.20	-1.7
5,100,782	+		Pf6N2E2_4372	0.22	-1.1
5,100,886	+		Pf6N2E2_4372	0.30	-0.2
5,100,896	+		Pf6N2E2_4372	0.31	-1.1
5,100,896	+		Pf6N2E2_4372	0.31	-1.2
5,100,896	+		Pf6N2E2_4372	0.31	+0.1