Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4194

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,879,426	-		Pf6N2E2_4193	0.64	-3.0
4,879,426	-		Pf6N2E2_4193	0.64	-0.9
4,879,524	+		Pf6N2E2_4193	0.70	-1.3
4,879,525	-		Pf6N2E2_4193	0.70	-2.4
4,879,525	-		Pf6N2E2_4193	0.70	-1.2
4,879,593	+		Pf6N2E2_4193	0.75	-0.5
4,879,602	-		Pf6N2E2_4193	0.76	-1.3
4,879,781	+		Pf6N2E2_4193	0.87	-0.2
4,879,781	+		Pf6N2E2_4193	0.87	+2.5
4,879,886	+				+1.2
4,879,887	-				+0.0
4,879,887	-				+1.5
4,879,972	+				+1.1
4,879,972	+				-1.8
4,879,973	-				+0.2
4,879,973	-				-2.9
4,880,010	-				-1.8
4,880,032	+				+0.7
4,880,032	+				-1.9
4,880,032	+				-2.7
4,880,032	+				-2.2
4,880,033	-				+1.6
4,880,033	-				+1.3
4,880,033	-				+0.5
4,880,033	-				+0.2
4,880,033	-				+1.3
4,880,090	-				-2.7
4,880,208	+				+2.2
4,880,208	+				+0.2
4,880,507	+		Pf6N2E2_4194	0.42	-2.3
4,880,507	+		Pf6N2E2_4194	0.42	+2.2
4,880,508	-		Pf6N2E2_4194	0.43	-0.6
4,880,508	-		Pf6N2E2_4194	0.43	-1.7
4,880,508	-		Pf6N2E2_4194	0.43	+1.6
4,880,508	-		Pf6N2E2_4194	0.43	+1.4
4,880,741	+		Pf6N2E2_4194	0.74	+1.8
4,880,742	-		Pf6N2E2_4194	0.74	+0.1
4,880,742	-		Pf6N2E2_4194	0.74	-2.3
4,880,742	-		Pf6N2E2_4194	0.74	+1.5
4,880,742	-		Pf6N2E2_4194	0.74	-1.9
4,880,747	+		Pf6N2E2_4194	0.75	-0.5
4,880,748	-		Pf6N2E2_4194	0.75	+0.3
4,880,748	-		Pf6N2E2_4194	0.75	-2.5
4,880,803	+		Pf6N2E2_4194	0.83	-1.9
4,880,803	+		Pf6N2E2_4194	0.83	+1.5
4,880,803	+		Pf6N2E2_4194	0.83	+0.9
4,880,803	+		Pf6N2E2_4194	0.83	-0.5
4,880,804	-		Pf6N2E2_4194	0.83	-1.0
4,880,804	-		Pf6N2E2_4194	0.83	+0.5
4,880,804	-		Pf6N2E2_4194	0.83	+0.7
4,880,804	-		Pf6N2E2_4194	0.83	+0.5
4,880,804	-		Pf6N2E2_4194	0.83	-1.9
4,880,804	-		Pf6N2E2_4194	0.83	-0.9
4,880,804	-		Pf6N2E2_4194	0.83	+0.8
4,880,804	-		Pf6N2E2_4194	0.83	-2.0
4,880,807	+		Pf6N2E2_4194	0.83	+0.4
4,880,807	+		Pf6N2E2_4194	0.83	+0.1
4,880,808	-		Pf6N2E2_4194	0.83	+1.3
4,880,808	-		Pf6N2E2_4194	0.83	-0.9
4,880,808	-		Pf6N2E2_4194	0.83	-3.0
4,880,808	-		Pf6N2E2_4194	0.83	+0.6
4,880,867	+				-1.8
4,880,867	+				-0.9
4,880,867	+				-0.5
4,880,927	+				-1.9
4,880,927	+				-2.6
4,880,927	+				+2.9
4,880,927	+				+0.4
4,880,928	-				-0.1
4,880,928	-				-2.6
4,880,931	+				-1.6
4,880,931	+				-1.2
4,880,931	+				+0.1
4,880,931	+				+0.9
4,880,932	-				-3.0
4,880,932	-				+2.5
4,880,932	-				-2.4
4,880,938	+				-1.1
4,880,938	+				-3.0
4,880,939	-				-0.6
4,880,939	-				+0.4
4,880,939	-				+1.8
4,880,939	-				-1.8
4,881,056	+				+1.7
4,881,056	+				-0.0
4,881,057	-				-1.6
4,881,057	-				-1.9
4,881,057	-				+0.9
4,881,110	-				-1.5
4,881,110	-				+2.5
4,881,125	-				-2.3
4,881,231	-		Pf6N2E2_4195	0.12	-0.1
4,881,231	-		Pf6N2E2_4195	0.12	+1.5
4,881,231	-		Pf6N2E2_4195	0.12	-0.8
4,881,330	-		Pf6N2E2_4195	0.19	+2.0
4,881,330	-		Pf6N2E2_4195	0.19	+2.8
4,881,330	-		Pf6N2E2_4195	0.19	+0.2
4,881,330	-		Pf6N2E2_4195	0.19	-1.9
4,881,395	+		Pf6N2E2_4195	0.24	+0.9
4,881,395	+		Pf6N2E2_4195	0.24	-0.9
4,881,395	+		Pf6N2E2_4195	0.24	-0.4
4,881,395	+		Pf6N2E2_4195	0.24	+1.0
4,881,395	+		Pf6N2E2_4195	0.24	+0.1
4,881,395	+		Pf6N2E2_4195	0.24	-0.6
4,881,395	+		Pf6N2E2_4195	0.24	+2.6
4,881,395	+		Pf6N2E2_4195	0.24	+0.9
4,881,395	+		Pf6N2E2_4195	0.24	+0.6
4,881,395	+		Pf6N2E2_4195	0.24	-1.3
4,881,395	+		Pf6N2E2_4195	0.24	-0.3
4,881,395	+		Pf6N2E2_4195	0.24	+0.8
4,881,396	-		Pf6N2E2_4195	0.24	-1.4
4,881,396	-		Pf6N2E2_4195	0.24	-2.4
4,881,396	-		Pf6N2E2_4195	0.24	+0.8
4,881,396	-		Pf6N2E2_4195	0.24	-0.8
4,881,396	-		Pf6N2E2_4195	0.24	+3.5
4,881,396	-		Pf6N2E2_4195	0.24	+1.7
4,881,396	-		Pf6N2E2_4195	0.24	+1.5
4,881,396	-		Pf6N2E2_4195	0.24	-0.3
4,881,396	-		Pf6N2E2_4195	0.24	+0.6
4,881,396	-		Pf6N2E2_4195	0.24	-0.4
4,881,396	-		Pf6N2E2_4195	0.24	-2.2
4,881,396	-		Pf6N2E2_4195	0.24	+0.3
4,881,396	-		Pf6N2E2_4195	0.24	-0.9
4,881,449	+		Pf6N2E2_4195	0.28	-1.8
4,881,449	+		Pf6N2E2_4195	0.28	+1.2
4,881,449	+		Pf6N2E2_4195	0.28	-0.9
4,881,450	-		Pf6N2E2_4195	0.28	+0.3
4,881,450	-		Pf6N2E2_4195	0.28	-0.3
4,881,450	-		Pf6N2E2_4195	0.28	+0.9
4,881,456	+		Pf6N2E2_4195	0.29	-1.5
4,881,457	-		Pf6N2E2_4195	0.29	+0.4
4,881,537	-		Pf6N2E2_4195	0.34	-2.6
4,881,537	-		Pf6N2E2_4195	0.34	+1.3
4,881,537	-		Pf6N2E2_4195	0.34	+0.5
4,881,537	-		Pf6N2E2_4195	0.34	+2.6
4,881,537	-		Pf6N2E2_4195	0.34	+1.4
4,881,635	+		Pf6N2E2_4195	0.41	-2.9
4,881,635	+		Pf6N2E2_4195	0.41	+0.8
4,881,673	+		Pf6N2E2_4195	0.44	-3.0
4,881,674	-		Pf6N2E2_4195	0.44	-1.5
4,881,707	+		Pf6N2E2_4195	0.47	+2.0
4,881,707	+		Pf6N2E2_4195	0.47	-1.4
4,881,707	+		Pf6N2E2_4195	0.47	+1.3
4,881,707	+		Pf6N2E2_4195	0.47	+2.6
4,881,708	-		Pf6N2E2_4195	0.47	+2.0
4,881,708	-		Pf6N2E2_4195	0.47	+1.1
4,881,708	-		Pf6N2E2_4195	0.47	-0.1
4,881,708	-		Pf6N2E2_4195	0.47	-2.1