Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4043

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,724,008	+				-1.3
4,724,009	-				-0.2
4,724,049	+				-0.5
4,724,085	-				-1.9
4,724,116	+				+0.0
4,724,117	-				+1.7
4,724,142	+				+1.1
4,724,142	+				-2.4
4,724,143	-				-0.4
4,724,143	-				-2.3
4,724,301	-				+3.1
4,724,313	-				-0.7
4,724,313	-				-1.4
4,724,319	+				-3.1
4,724,350	-				-1.7
4,724,354	-				+0.6
4,724,404	+				+1.6
4,724,405	-				+1.2
4,724,443	+				-3.8
4,724,443	+				-2.1
4,724,443	+				+0.1
4,724,443	+				+1.2
4,724,443	+				+2.1
4,724,780	+				-2.7
4,724,781	-				-0.9
4,724,791	+				-1.5
4,724,794	-				+2.0
4,724,812	+				-1.0
4,724,813	-				-0.4
4,724,818	+				+1.0
4,724,819	-				+0.0
4,724,819	-				+2.0
4,724,900	+				-1.6
4,724,900	+				+0.5
4,724,900	+				-2.4
4,724,901	-				+1.3
4,724,901	-				+0.4
4,724,901	-				+1.9
4,724,901	-				+0.8
4,724,904	-				-2.9
4,724,904	-				-0.5
4,724,954	+				+0.9
4,724,955	-				+1.2
4,724,955	-				+1.6
4,724,955	-				-1.2
4,724,955	-				-2.1
4,724,955	-				-1.9
4,724,955	-				+2.7
4,725,241	+		Pf6N2E2_4043	0.77	-1.7
4,725,241	+		Pf6N2E2_4043	0.77	+0.2
4,725,241	+		Pf6N2E2_4043	0.77	+0.9
4,725,241	+		Pf6N2E2_4043	0.77	-2.5
4,725,242	-		Pf6N2E2_4043	0.78	-2.4
4,725,242	-		Pf6N2E2_4043	0.78	+0.1
4,725,242	-		Pf6N2E2_4043	0.78	-3.3
4,725,242	-		Pf6N2E2_4043	0.78	-1.6
4,725,459	+		Pf6N2E2_4044	0.13	-2.7
4,725,460	-		Pf6N2E2_4044	0.13	-1.6
4,725,527	+		Pf6N2E2_4044	0.35	-2.4
4,725,565	+		Pf6N2E2_4044	0.47	-3.3
4,725,565	+		Pf6N2E2_4044	0.47	-0.4
4,725,565	+		Pf6N2E2_4044	0.47	-2.9
4,725,566	-		Pf6N2E2_4044	0.48	-3.5
4,725,656	+		Pf6N2E2_4044	0.77	-3.0
4,725,725	+				+2.2
4,725,725	+				+1.6
4,725,725	+				+1.6
4,725,725	+				+1.6
4,725,725	+				+0.8
4,725,725	+				-0.4
4,725,725	+				+2.3
4,725,726	-				+1.4
4,725,726	-				+2.5
4,725,726	-				-2.7
4,725,726	-				-2.9
4,725,726	-				+0.3
4,725,726	-				-1.1
4,725,726	-				-3.0
4,725,726	-				-1.7
4,725,726	-				-1.6
4,725,726	-				-1.6
4,725,729	+				+2.1
4,725,730	-				-1.9
4,725,730	-				-0.4
4,725,730	-				-0.7
4,725,730	-				-1.8
4,725,730	-				-0.8
4,725,735	+				+0.2
4,725,735	+				+1.6
4,725,735	+				+1.7
4,725,735	+				+0.5
4,725,736	-				+0.5
4,725,736	-				-0.7
4,725,736	-				-2.3
4,725,736	-				-2.2
4,725,736	-				-3.3
4,725,736	-				-1.9
4,725,736	-				-1.8
4,725,761	-				-1.7
4,725,783	+				-1.5
4,725,820	+		Pf6N2E2_4045	0.20	-1.1
4,725,820	+		Pf6N2E2_4045	0.20	-0.8
4,725,820	+		Pf6N2E2_4045	0.20	-0.5
4,725,821	-		Pf6N2E2_4045	0.21	-1.3
4,725,821	-		Pf6N2E2_4045	0.21	-2.3
4,725,821	-		Pf6N2E2_4045	0.21	-1.1
4,725,839	-		Pf6N2E2_4045	0.26	-0.0
4,725,839	-		Pf6N2E2_4045	0.26	+0.2