Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_396

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
463,558	+		Pf6N2E2_395	0.37	+1.9
463,602	+		Pf6N2E2_395	0.47	-2.2
463,603	-		Pf6N2E2_395	0.48	-2.7
463,697	+		Pf6N2E2_395	0.69	+0.1
463,698	-		Pf6N2E2_395	0.70	+1.4
463,731	-		Pf6N2E2_395	0.77	+1.9
463,795	-				-2.1
463,795	-				+2.1
463,882	-				+1.6
463,924	-				-1.4
463,957	-				-2.3
464,009	-				+0.6
464,009	-				-0.9
464,475	+				-0.7
464,476	-				-0.0
464,508	-				+2.1
464,508	-				-0.8
464,508	-				-1.3
464,508	-				-1.2
464,511	+				-2.4
464,511	+				-1.8
464,511	+				+0.6
464,511	+				-0.4
464,512	-				-0.1
464,512	-				+1.6
464,532	+				+1.2
464,532	+				-1.8
464,533	-				+0.4
464,533	-				+0.2
464,594	-		Pf6N2E2_396	0.20	-0.4
464,594	-		Pf6N2E2_396	0.20	-0.7
464,594	-		Pf6N2E2_396	0.20	-0.9
464,690	+		Pf6N2E2_396	0.43	-2.3
464,719	-		Pf6N2E2_396	0.50	-1.2
464,719	-		Pf6N2E2_396	0.50	-0.3
464,812	+		Pf6N2E2_396	0.73	-0.7
464,812	+		Pf6N2E2_396	0.73	-0.7
464,812	+		Pf6N2E2_396	0.73	+1.9
464,846	+		Pf6N2E2_396	0.82	-2.5
464,857	+		Pf6N2E2_396	0.84	+2.1
464,900	+				-2.4
464,900	+				-0.5
464,901	-				+2.1
464,901	-				-0.5
464,901	-				-2.1
464,913	+				+1.2
464,913	+				+0.1
464,914	-				+2.2
464,914	-				-0.7
464,914	-				-3.3
464,918	+				-2.3
464,918	+				+1.1
464,918	+				-1.8
464,919	-				-1.9
464,919	-				+0.9
464,919	-				-0.2
464,919	-				+3.4
464,919	-				+1.2
464,919	-				+0.9
464,919	-				+1.4
464,930	+				-1.9
465,034	+				+2.1
465,035	-				+0.2
465,084	+				-1.5
465,084	+				+1.6
465,085	-				-0.9
465,085	-				+2.2
465,085	-				-2.4
465,085	-				+1.5
465,085	-				+1.2
465,225	+				+2.0
465,225	+				-0.7
465,226	-				-1.4
465,226	-				-2.6
465,226	-				-2.3
465,226	-				+1.2
465,226	-				-3.2
465,226	-				-2.9
465,226	-				+1.2
465,348	+		Pf6N2E2_397	0.14	-0.7
465,391	-		Pf6N2E2_397	0.16	+2.6
465,404	+		Pf6N2E2_397	0.17	-0.5
465,404	+		Pf6N2E2_397	0.17	+1.1
465,446	+		Pf6N2E2_397	0.19	-3.4
465,446	+		Pf6N2E2_397	0.19	-3.6
465,473	+		Pf6N2E2_397	0.20	+1.5
465,473	+		Pf6N2E2_397	0.20	+2.3
465,473	+		Pf6N2E2_397	0.20	+2.2
465,473	+		Pf6N2E2_397	0.20	+1.0
465,474	-		Pf6N2E2_397	0.20	-1.2
465,474	-		Pf6N2E2_397	0.20	-1.8
465,474	-		Pf6N2E2_397	0.20	-0.0
465,474	-		Pf6N2E2_397	0.20	+1.3
465,474	-		Pf6N2E2_397	0.20	+1.1
465,474	-		Pf6N2E2_397	0.20	+0.9
465,474	-		Pf6N2E2_397	0.20	-1.7
465,551	+		Pf6N2E2_397	0.24	+2.1
465,552	-		Pf6N2E2_397	0.24	+0.3
465,691	-		Pf6N2E2_397	0.31	+1.3
465,820	+		Pf6N2E2_397	0.38	-1.4
465,843	+		Pf6N2E2_397	0.39	+1.3
465,874	+		Pf6N2E2_397	0.41	+2.0
465,875	-		Pf6N2E2_397	0.41	-2.8