Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3895

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,526,743	+		Pf6N2E2_3894	0.31	-2.5
4,526,744	-		Pf6N2E2_3894	0.31	-2.5
4,526,749	+		Pf6N2E2_3894	0.32	-2.4
4,526,749	+		Pf6N2E2_3894	0.32	-1.1
4,526,749	+		Pf6N2E2_3894	0.32	-0.1
4,526,749	+		Pf6N2E2_3894	0.32	-1.2
4,526,750	-		Pf6N2E2_3894	0.32	-1.9
4,526,750	-		Pf6N2E2_3894	0.32	-1.6
4,526,750	-		Pf6N2E2_3894	0.32	-1.9
4,526,750	-		Pf6N2E2_3894	0.32	-0.7
4,526,750	-		Pf6N2E2_3894	0.32	+2.7
4,526,750	-		Pf6N2E2_3894	0.32	-0.2
4,526,806	-		Pf6N2E2_3894	0.36	+0.9
4,526,884	+		Pf6N2E2_3894	0.43	+1.6
4,526,885	-		Pf6N2E2_3894	0.43	-1.5
4,526,986	+		Pf6N2E2_3894	0.51	-0.9
4,526,986	+		Pf6N2E2_3894	0.51	-2.7
4,526,986	+		Pf6N2E2_3894	0.51	+0.9
4,526,986	+		Pf6N2E2_3894	0.51	-2.5
4,526,986	+		Pf6N2E2_3894	0.51	+1.8
4,526,987	-		Pf6N2E2_3894	0.51	-0.2
4,526,987	-		Pf6N2E2_3894	0.51	+1.1
4,526,987	-		Pf6N2E2_3894	0.51	-1.8
4,526,987	-		Pf6N2E2_3894	0.51	+1.2
4,526,987	-		Pf6N2E2_3894	0.51	+1.1
4,526,987	-		Pf6N2E2_3894	0.51	-3.0
4,526,987	-		Pf6N2E2_3894	0.51	+1.0
4,527,343	+		Pf6N2E2_3894	0.80	+0.2
4,527,424	+		Pf6N2E2_3894	0.87	-1.4
4,527,424	+		Pf6N2E2_3894	0.87	-1.1
4,527,424	+		Pf6N2E2_3894	0.87	+0.6
4,527,424	+		Pf6N2E2_3894	0.87	+0.8
4,527,424	+		Pf6N2E2_3894	0.87	+0.6
4,527,424	+		Pf6N2E2_3894	0.87	-2.0
4,527,424	+		Pf6N2E2_3894	0.87	-1.8
4,527,425	-		Pf6N2E2_3894	0.87	-2.3
4,527,425	-		Pf6N2E2_3894	0.87	-1.1
4,527,425	-		Pf6N2E2_3894	0.87	+0.4
4,527,425	-		Pf6N2E2_3894	0.87	-2.4
4,527,425	-		Pf6N2E2_3894	0.87	-0.2
4,527,657	-				+1.1
4,527,739	-				-0.1
4,527,756	+				+1.9
4,527,757	-				+0.6
4,527,757	-				-0.7
4,528,008	+		Pf6N2E2_3895	0.16	-2.1
4,528,009	-		Pf6N2E2_3895	0.16	+0.5
4,528,104	+		Pf6N2E2_3895	0.21	-0.6
4,528,104	+		Pf6N2E2_3895	0.21	+1.4
4,528,104	+		Pf6N2E2_3895	0.21	+0.5
4,528,104	+		Pf6N2E2_3895	0.21	-1.6
4,528,104	+		Pf6N2E2_3895	0.21	-0.6
4,528,105	-		Pf6N2E2_3895	0.21	+2.6
4,528,105	-		Pf6N2E2_3895	0.21	-1.8
4,528,105	-		Pf6N2E2_3895	0.21	-1.9
4,528,105	-		Pf6N2E2_3895	0.21	-1.9
4,528,105	-		Pf6N2E2_3895	0.21	+0.0
4,528,105	-		Pf6N2E2_3895	0.21	+1.8
4,528,105	-		Pf6N2E2_3895	0.21	-1.6
4,528,135	+		Pf6N2E2_3895	0.23	+0.4
4,528,161	+		Pf6N2E2_3895	0.24	-3.2
4,528,161	+		Pf6N2E2_3895	0.24	+1.8
4,528,161	+		Pf6N2E2_3895	0.24	+1.9
4,528,161	+		Pf6N2E2_3895	0.24	-0.1
4,528,162	-		Pf6N2E2_3895	0.24	-1.9
4,528,162	-		Pf6N2E2_3895	0.24	-1.9
4,528,215	+		Pf6N2E2_3895	0.27	+0.5
4,528,215	+		Pf6N2E2_3895	0.27	+1.9
4,528,215	+		Pf6N2E2_3895	0.27	+0.8
4,528,216	-		Pf6N2E2_3895	0.27	-0.7
4,528,216	-		Pf6N2E2_3895	0.27	-2.4
4,528,216	-		Pf6N2E2_3895	0.27	-1.1
4,528,216	-		Pf6N2E2_3895	0.27	+1.0
4,528,254	+		Pf6N2E2_3895	0.29	+0.8
4,528,263	+		Pf6N2E2_3895	0.29	-1.7
4,528,263	+		Pf6N2E2_3895	0.29	-1.3
4,528,264	-		Pf6N2E2_3895	0.29	+0.7
4,528,410	+		Pf6N2E2_3895	0.37	-2.4
4,528,410	+		Pf6N2E2_3895	0.37	-1.4
4,528,410	+		Pf6N2E2_3895	0.37	+0.4
4,528,411	-		Pf6N2E2_3895	0.37	+0.1
4,528,416	+		Pf6N2E2_3895	0.37	-1.4
4,528,597	-		Pf6N2E2_3895	0.47	-2.4
4,528,641	-		Pf6N2E2_3895	0.49	-1.1
4,528,695	+		Pf6N2E2_3895	0.52	-0.9
4,528,695	+		Pf6N2E2_3895	0.52	-1.0
4,528,858	-		Pf6N2E2_3895	0.60	+1.5
4,528,858	-		Pf6N2E2_3895	0.60	-2.5
4,528,929	+		Pf6N2E2_3895	0.64	-1.9
4,528,929	+		Pf6N2E2_3895	0.64	+1.2
4,528,929	+		Pf6N2E2_3895	0.64	-2.9
4,528,930	-		Pf6N2E2_3895	0.64	-2.6
4,528,930	-		Pf6N2E2_3895	0.64	-0.5
4,528,930	-		Pf6N2E2_3895	0.64	-2.5
4,528,930	-		Pf6N2E2_3895	0.64	+0.1
4,529,034	+		Pf6N2E2_3895	0.69	+0.4
4,529,157	+		Pf6N2E2_3895	0.76	-1.0
4,529,175	+		Pf6N2E2_3895	0.77	+0.7
4,529,175	+		Pf6N2E2_3895	0.77	+2.3
4,529,191	+		Pf6N2E2_3895	0.78	-0.3
4,529,191	+		Pf6N2E2_3895	0.78	-1.7
4,529,209	+		Pf6N2E2_3895	0.78	+0.1
4,529,210	-		Pf6N2E2_3895	0.79	-2.5
4,529,377	+		Pf6N2E2_3895	0.87	-2.3
4,529,429	-		Pf6N2E2_3895	0.90	+1.2
4,529,450	+				+2.0
4,529,490	+				+0.9
4,529,490	+				-3.2
4,529,491	-				-0.7
4,529,491	-				-1.4
4,529,719	+				+0.7
4,529,719	+				-1.5
4,529,720	-				-0.6
4,529,720	-				+1.3
4,529,757	-				+0.4
4,529,804	-				+0.8
4,529,818	-				+2.2
4,529,897	-				-1.1
4,529,994	+		Pf6N2E2_3896	0.11	+1.4
4,529,994	+		Pf6N2E2_3896	0.11	+0.3
4,530,037	+		Pf6N2E2_3896	0.15	-1.7
4,530,038	-		Pf6N2E2_3896	0.15	-0.8
4,530,038	-		Pf6N2E2_3896	0.15	+1.4
4,530,038	-		Pf6N2E2_3896	0.15	+2.1
4,530,038	-		Pf6N2E2_3896	0.15	-0.9
4,530,038	-		Pf6N2E2_3896	0.15	+1.2
4,530,038	-		Pf6N2E2_3896	0.15	-0.7
4,530,038	-		Pf6N2E2_3896	0.15	+0.4
4,530,038	-		Pf6N2E2_3896	0.15	+1.8
4,530,038	-		Pf6N2E2_3896	0.15	+0.1
4,530,039	+		Pf6N2E2_3896	0.15	-2.3
4,530,039	+		Pf6N2E2_3896	0.15	-0.1
4,530,039	+		Pf6N2E2_3896	0.15	-1.3
4,530,039	+		Pf6N2E2_3896	0.15	-0.4
4,530,039	+		Pf6N2E2_3896	0.15	-2.4
4,530,040	-		Pf6N2E2_3896	0.16	-1.3
4,530,040	-		Pf6N2E2_3896	0.16	-2.0
4,530,040	-		Pf6N2E2_3896	0.16	+0.3
4,530,040	-		Pf6N2E2_3896	0.16	+1.9
4,530,040	-		Pf6N2E2_3896	0.16	-2.0
4,530,040	-		Pf6N2E2_3896	0.16	-2.9
4,530,040	-		Pf6N2E2_3896	0.16	+1.7
4,530,040	-		Pf6N2E2_3896	0.16	+2.3
4,530,040	-		Pf6N2E2_3896	0.16	+1.9
4,530,040	-		Pf6N2E2_3896	0.16	+0.8
4,530,147	+		Pf6N2E2_3896	0.26	-0.3
4,530,147	+		Pf6N2E2_3896	0.26	+0.1
4,530,208	+		Pf6N2E2_3896	0.31	-2.5
4,530,209	-		Pf6N2E2_3896	0.31	-1.1
4,530,236	+		Pf6N2E2_3896	0.34	+1.6
4,530,236	+		Pf6N2E2_3896	0.34	+2.0
4,530,417	+		Pf6N2E2_3896	0.51	+1.1
4,530,497	+		Pf6N2E2_3896	0.58	-1.9