Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3893

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,524,906	+				+2.1
4,524,906	+				+1.7
4,524,906	+				+0.1
4,524,906	+				-2.1
4,524,907	-				+0.3
4,524,907	-				+0.9
4,524,907	-				+0.1
4,525,046	+				+2.0
4,525,046	+				-1.1
4,525,046	+				+2.2
4,525,046	+				-3.0
4,525,046	+				+1.5
4,525,046	+				-0.4
4,525,046	+				-1.0
4,525,047	-				+0.7
4,525,047	-				-2.3
4,525,133	+				+1.2
4,525,133	+				+0.2
4,525,134	-				+1.8
4,525,134	-				+1.6
4,525,190	-				-0.2
4,525,279	+				+1.0
4,525,284	+				-0.7
4,525,285	-				+1.0
4,525,403	+		Pf6N2E2_3892	0.14	-0.9
4,525,491	-		Pf6N2E2_3892	0.32	+1.5
4,525,680	+		Pf6N2E2_3892	0.71	-0.1
4,525,680	+		Pf6N2E2_3892	0.71	+1.7
4,525,680	+		Pf6N2E2_3892	0.71	+0.8
4,525,680	+		Pf6N2E2_3892	0.71	+0.9
4,525,680	+		Pf6N2E2_3892	0.71	+2.1
4,525,680	+		Pf6N2E2_3892	0.71	-2.9
4,525,680	+		Pf6N2E2_3892	0.71	+0.9
4,525,680	+		Pf6N2E2_3892	0.71	+0.7
4,525,680	+		Pf6N2E2_3892	0.71	+2.3
4,525,680	+		Pf6N2E2_3892	0.71	+0.2
4,525,680	+		Pf6N2E2_3892	0.71	-1.1
4,525,680	+		Pf6N2E2_3892	0.71	+1.7
4,525,680	+		Pf6N2E2_3892	0.71	+1.1
4,525,680	+		Pf6N2E2_3892	0.71	+1.2
4,525,680	+		Pf6N2E2_3892	0.71	-0.1
4,525,680	+		Pf6N2E2_3892	0.71	+2.5
4,525,680	+		Pf6N2E2_3892	0.71	-2.0
4,525,680	+		Pf6N2E2_3892	0.71	-3.0
4,525,681	-		Pf6N2E2_3892	0.71	-1.0
4,525,681	-		Pf6N2E2_3892	0.71	-0.0
4,525,681	-		Pf6N2E2_3892	0.71	-0.9
4,525,681	-		Pf6N2E2_3892	0.71	-1.3
4,525,681	-		Pf6N2E2_3892	0.71	-2.2
4,525,681	-		Pf6N2E2_3892	0.71	-0.9
4,525,681	-		Pf6N2E2_3892	0.71	-0.2
4,525,681	-		Pf6N2E2_3892	0.71	-1.5
4,525,681	-		Pf6N2E2_3892	0.71	+0.9
4,525,681	-		Pf6N2E2_3892	0.71	+0.5
4,525,713	+		Pf6N2E2_3892	0.78	-0.3
4,525,714	-		Pf6N2E2_3892	0.78	+1.5
4,525,714	-		Pf6N2E2_3892	0.78	-2.2
4,525,740	+		Pf6N2E2_3892	0.84	+0.2
4,525,743	+		Pf6N2E2_3892	0.84	-0.1
4,525,743	+		Pf6N2E2_3892	0.84	+1.8
4,525,744	-		Pf6N2E2_3892	0.85	-0.9
4,525,803	+				+2.4
4,525,803	+				-1.1
4,525,807	-				+1.9
4,525,829	+				-0.0
4,525,926	+				-0.6
4,525,927	-				-0.6
4,525,974	+		Pf6N2E2_3893	0.19	+1.2
4,525,974	+		Pf6N2E2_3893	0.19	-2.1
4,525,975	-		Pf6N2E2_3893	0.19	+1.4
4,525,975	-		Pf6N2E2_3893	0.19	-2.2
4,525,975	-		Pf6N2E2_3893	0.19	-2.7
4,525,975	-		Pf6N2E2_3893	0.19	+0.3
4,526,039	-		Pf6N2E2_3893	0.34	-0.2
4,526,116	+		Pf6N2E2_3893	0.52	-1.9
4,526,116	+		Pf6N2E2_3893	0.52	-0.7
4,526,117	-		Pf6N2E2_3893	0.53	-3.0
4,526,117	-		Pf6N2E2_3893	0.53	+1.2
4,526,117	-		Pf6N2E2_3893	0.53	+0.3
4,526,117	-		Pf6N2E2_3893	0.53	+1.6
4,526,117	-		Pf6N2E2_3893	0.53	-0.6
4,526,117	-		Pf6N2E2_3893	0.53	+1.6
4,526,117	-		Pf6N2E2_3893	0.53	+1.0
4,526,117	-		Pf6N2E2_3893	0.53	-4.2
4,526,117	-		Pf6N2E2_3893	0.53	+0.2
4,526,191	+		Pf6N2E2_3893	0.70	-2.9
4,526,191	+		Pf6N2E2_3893	0.70	-1.3
4,526,191	+		Pf6N2E2_3893	0.70	+1.7
4,526,191	+		Pf6N2E2_3893	0.70	+1.4
4,526,191	+		Pf6N2E2_3893	0.70	+0.4
4,526,192	-		Pf6N2E2_3893	0.70	+1.1
4,526,192	-		Pf6N2E2_3893	0.70	+0.5
4,526,192	-		Pf6N2E2_3893	0.70	+2.1
4,526,192	-		Pf6N2E2_3893	0.70	+0.3
4,526,192	-		Pf6N2E2_3893	0.70	+0.9
4,526,192	-		Pf6N2E2_3893	0.70	-2.2
4,526,192	-		Pf6N2E2_3893	0.70	+1.2
4,526,195	+		Pf6N2E2_3893	0.71	-1.3
4,526,195	+		Pf6N2E2_3893	0.71	-1.7
4,526,196	-		Pf6N2E2_3893	0.71	+1.6
4,526,196	-		Pf6N2E2_3893	0.71	-0.5
4,526,196	-		Pf6N2E2_3893	0.71	-2.8
4,526,222	-		Pf6N2E2_3893	0.78	+1.6
4,526,222	-		Pf6N2E2_3893	0.78	+1.7
4,526,222	-		Pf6N2E2_3893	0.78	+1.6
4,526,224	+		Pf6N2E2_3893	0.78	-0.7
4,526,224	+		Pf6N2E2_3893	0.78	-1.6
4,526,224	+		Pf6N2E2_3893	0.78	+0.4
4,526,224	+		Pf6N2E2_3893	0.78	+1.1
4,526,224	+		Pf6N2E2_3893	0.78	-2.4
4,526,224	+		Pf6N2E2_3893	0.78	-2.9
4,526,224	+		Pf6N2E2_3893	0.78	+2.5
4,526,225	-		Pf6N2E2_3893	0.78	+2.6
4,526,225	-		Pf6N2E2_3893	0.78	-3.4
4,526,225	-		Pf6N2E2_3893	0.78	-2.0
4,526,225	-		Pf6N2E2_3893	0.78	-0.5
4,526,248	+		Pf6N2E2_3893	0.84	+1.8
4,526,248	+		Pf6N2E2_3893	0.84	-2.2
4,526,249	-		Pf6N2E2_3893	0.84	+1.1
4,526,277	-				+0.6
4,526,277	-				-2.9
4,526,670	+		Pf6N2E2_3894	0.25	-0.6
4,526,743	+		Pf6N2E2_3894	0.31	-2.5
4,526,744	-		Pf6N2E2_3894	0.31	-2.5
4,526,749	+		Pf6N2E2_3894	0.32	-2.4
4,526,749	+		Pf6N2E2_3894	0.32	-1.1
4,526,749	+		Pf6N2E2_3894	0.32	-0.1
4,526,749	+		Pf6N2E2_3894	0.32	-1.2
4,526,750	-		Pf6N2E2_3894	0.32	-1.9
4,526,750	-		Pf6N2E2_3894	0.32	-1.6
4,526,750	-		Pf6N2E2_3894	0.32	-1.9
4,526,750	-		Pf6N2E2_3894	0.32	-0.7
4,526,750	-		Pf6N2E2_3894	0.32	+2.7
4,526,750	-		Pf6N2E2_3894	0.32	-0.2
4,526,806	-		Pf6N2E2_3894	0.36	+0.9
4,526,884	+		Pf6N2E2_3894	0.43	+1.6
4,526,885	-		Pf6N2E2_3894	0.43	-1.5
4,526,986	+		Pf6N2E2_3894	0.51	-0.9
4,526,986	+		Pf6N2E2_3894	0.51	-2.7
4,526,986	+		Pf6N2E2_3894	0.51	+0.9
4,526,986	+		Pf6N2E2_3894	0.51	-2.5
4,526,986	+		Pf6N2E2_3894	0.51	+1.8
4,526,987	-		Pf6N2E2_3894	0.51	-0.2
4,526,987	-		Pf6N2E2_3894	0.51	+1.1
4,526,987	-		Pf6N2E2_3894	0.51	-1.8
4,526,987	-		Pf6N2E2_3894	0.51	+1.2
4,526,987	-		Pf6N2E2_3894	0.51	+1.1
4,526,987	-		Pf6N2E2_3894	0.51	-3.0
4,526,987	-		Pf6N2E2_3894	0.51	+1.0