Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3796

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,421,290	+		Pf6N2E2_3795	0.12	+1.1
4,421,290	+		Pf6N2E2_3795	0.12	-2.0
4,421,290	+		Pf6N2E2_3795	0.12	-1.1
4,421,290	+		Pf6N2E2_3795	0.12	+1.4
4,421,290	+		Pf6N2E2_3795	0.12	-3.7
4,421,291	-		Pf6N2E2_3795	0.12	-0.9
4,421,291	-		Pf6N2E2_3795	0.12	-0.3
4,421,291	-		Pf6N2E2_3795	0.12	-2.7
4,421,291	-		Pf6N2E2_3795	0.12	-0.6
4,421,333	-		Pf6N2E2_3795	0.16	-2.5
4,421,428	+		Pf6N2E2_3795	0.27	-1.3
4,421,428	+		Pf6N2E2_3795	0.27	-2.9
4,421,429	-		Pf6N2E2_3795	0.27	-1.9
4,421,429	-		Pf6N2E2_3795	0.27	-0.3
4,421,455	+		Pf6N2E2_3795	0.30	-1.7
4,421,610	+		Pf6N2E2_3795	0.47	-2.6
4,421,908	+		Pf6N2E2_3795	0.79	+1.1
4,421,908	+		Pf6N2E2_3795	0.79	-2.6
4,421,909	-		Pf6N2E2_3795	0.79	-2.7
4,422,088	+				-0.0
4,422,089	-				-0.7
4,422,466	+		Pf6N2E2_3796	0.24	-1.3
4,422,466	+		Pf6N2E2_3796	0.24	-0.6
4,422,467	-		Pf6N2E2_3796	0.24	-2.9
4,422,517	+		Pf6N2E2_3796	0.29	-1.2
4,422,517	+		Pf6N2E2_3796	0.29	-0.2
4,422,517	+		Pf6N2E2_3796	0.29	-0.2
4,422,518	-		Pf6N2E2_3796	0.29	+0.9
4,422,518	-		Pf6N2E2_3796	0.29	-1.7
4,422,518	-		Pf6N2E2_3796	0.29	+1.2
4,422,541	+		Pf6N2E2_3796	0.32	+1.0
4,422,541	+		Pf6N2E2_3796	0.32	-0.9
4,422,541	+		Pf6N2E2_3796	0.32	-3.4
4,422,541	+		Pf6N2E2_3796	0.32	-2.8
4,422,541	+		Pf6N2E2_3796	0.32	-1.8
4,422,745	+		Pf6N2E2_3796	0.53	-2.9
4,422,746	-		Pf6N2E2_3796	0.53	-2.4
4,422,746	-		Pf6N2E2_3796	0.53	-0.2
4,422,746	-		Pf6N2E2_3796	0.53	-1.6
4,422,817	+		Pf6N2E2_3796	0.61	-1.0
4,422,817	+		Pf6N2E2_3796	0.61	-2.7
4,422,817	+		Pf6N2E2_3796	0.61	-1.3
4,422,817	+		Pf6N2E2_3796	0.61	+1.9
4,422,870	+		Pf6N2E2_3796	0.66	-0.6
4,422,871	-		Pf6N2E2_3796	0.67	-0.2
4,422,871	-		Pf6N2E2_3796	0.67	-0.5
4,422,931	+		Pf6N2E2_3796	0.73	+0.5
4,423,219	+				-1.8
4,423,219	+				+0.2
4,423,220	-				+2.1
4,423,220	-				-0.2
4,423,220	-				-1.2
4,423,220	-				+0.8
4,423,220	-				-2.3
4,423,459	+				-2.8
4,423,459	+				-2.5
4,423,459	+				-0.7
4,423,459	+				+1.0
4,423,460	-				-2.8
4,423,460	-				-0.6
4,423,460	-				-3.6
4,423,460	-				-0.0
4,423,460	-				-1.7
4,423,460	-				-1.8
4,423,460	-				-0.0
4,423,460	-				+0.8
4,423,540	+		Pf6N2E2_3797	0.11	+1.5
4,423,540	+		Pf6N2E2_3797	0.11	-0.5
4,423,555	+		Pf6N2E2_3797	0.13	+1.8
4,423,555	+		Pf6N2E2_3797	0.13	-2.1
4,423,555	+		Pf6N2E2_3797	0.13	+1.1
4,423,555	+		Pf6N2E2_3797	0.13	+2.0
4,423,556	-		Pf6N2E2_3797	0.13	-1.8
4,423,556	-		Pf6N2E2_3797	0.13	-1.3
4,423,556	-		Pf6N2E2_3797	0.13	-1.3
4,423,567	+		Pf6N2E2_3797	0.15	-0.9
4,423,567	+		Pf6N2E2_3797	0.15	-2.7
4,423,567	+		Pf6N2E2_3797	0.15	-1.6
4,423,567	+		Pf6N2E2_3797	0.15	-2.6
4,423,567	+		Pf6N2E2_3797	0.15	-0.4
4,423,568	-		Pf6N2E2_3797	0.15	-0.3
4,423,568	-		Pf6N2E2_3797	0.15	-0.7
4,423,624	+		Pf6N2E2_3797	0.22	+0.0
4,423,635	-		Pf6N2E2_3797	0.23	+1.3
4,423,832	-		Pf6N2E2_3797	0.48	-0.2
4,423,883	-		Pf6N2E2_3797	0.54	-0.0
4,423,906	+		Pf6N2E2_3797	0.57	-0.6
4,423,906	+		Pf6N2E2_3797	0.57	-2.1
4,423,907	-		Pf6N2E2_3797	0.57	+1.6
4,423,907	-		Pf6N2E2_3797	0.57	-0.4
4,424,005	+		Pf6N2E2_3797	0.69	-1.6
4,424,005	+		Pf6N2E2_3797	0.69	+0.4
4,424,005	+		Pf6N2E2_3797	0.69	-0.2
4,424,005	+		Pf6N2E2_3797	0.69	-2.3
4,424,101	+		Pf6N2E2_3797	0.81	+0.7
4,424,102	-		Pf6N2E2_3797	0.81	-2.0
4,424,102	-		Pf6N2E2_3797	0.81	+1.7