Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3795

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,420,381	+		Pf6N2E2_3794	0.28	-2.4
4,420,381	+		Pf6N2E2_3794	0.28	-2.9
4,420,381	+		Pf6N2E2_3794	0.28	-3.4
4,420,382	-		Pf6N2E2_3794	0.28	-0.1
4,420,382	-		Pf6N2E2_3794	0.28	-2.3
4,420,382	-		Pf6N2E2_3794	0.28	-2.4
4,420,469	+		Pf6N2E2_3794	0.37	-2.5
4,420,469	+		Pf6N2E2_3794	0.37	+0.0
4,420,594	+		Pf6N2E2_3794	0.50	-0.9
4,420,594	+		Pf6N2E2_3794	0.50	-1.1
4,420,595	-		Pf6N2E2_3794	0.50	+1.4
4,420,595	-		Pf6N2E2_3794	0.50	-0.2
4,420,639	+		Pf6N2E2_3794	0.55	-2.1
4,420,639	+		Pf6N2E2_3794	0.55	-0.4
4,420,639	+		Pf6N2E2_3794	0.55	-0.4
4,420,640	-		Pf6N2E2_3794	0.55	+1.0
4,420,724	-		Pf6N2E2_3794	0.63	+1.2
4,420,915	+		Pf6N2E2_3794	0.83	-0.5
4,420,915	+		Pf6N2E2_3794	0.83	-1.0
4,420,915	+		Pf6N2E2_3794	0.83	+1.6
4,421,005	+				-2.1
4,421,006	-				-0.6
4,421,006	-				-2.1
4,421,121	+				-2.9
4,421,121	+				-0.9
4,421,121	+				-2.0
4,421,122	-				-1.5
4,421,122	-				-2.6
4,421,122	-				+1.3
4,421,122	-				+2.2
4,421,122	-				+0.7
4,421,122	-				-2.0
4,421,122	-				-2.0
4,421,125	+				-2.1
4,421,145	+				+0.6
4,421,145	+				-0.4
4,421,145	+				-2.5
4,421,146	-				+0.7
4,421,146	-				-3.1
4,421,146	-				-0.3
4,421,146	-				+1.6
4,421,146	-				-2.8
4,421,146	-				+0.9
4,421,146	-				+1.0
4,421,146	-				-0.7
4,421,156	+				-2.4
4,421,157	-				-0.3
4,421,162	-				-0.9
4,421,221	+				-0.7
4,421,221	+				-2.1
4,421,222	-				-1.2
4,421,222	-				+1.1
4,421,222	-				-2.3
4,421,290	+		Pf6N2E2_3795	0.12	+1.1
4,421,290	+		Pf6N2E2_3795	0.12	-2.0
4,421,290	+		Pf6N2E2_3795	0.12	-1.1
4,421,290	+		Pf6N2E2_3795	0.12	+1.4
4,421,290	+		Pf6N2E2_3795	0.12	-3.7
4,421,291	-		Pf6N2E2_3795	0.12	-0.9
4,421,291	-		Pf6N2E2_3795	0.12	-0.3
4,421,291	-		Pf6N2E2_3795	0.12	-2.7
4,421,291	-		Pf6N2E2_3795	0.12	-0.6
4,421,333	-		Pf6N2E2_3795	0.16	-2.5
4,421,428	+		Pf6N2E2_3795	0.27	-1.3
4,421,428	+		Pf6N2E2_3795	0.27	-2.9
4,421,429	-		Pf6N2E2_3795	0.27	-1.9
4,421,429	-		Pf6N2E2_3795	0.27	-0.3
4,421,455	+		Pf6N2E2_3795	0.30	-1.7
4,421,610	+		Pf6N2E2_3795	0.47	-2.6
4,421,908	+		Pf6N2E2_3795	0.79	+1.1
4,421,908	+		Pf6N2E2_3795	0.79	-2.6
4,421,909	-		Pf6N2E2_3795	0.79	-2.7
4,422,088	+				-0.0
4,422,089	-				-0.7
4,422,466	+		Pf6N2E2_3796	0.24	-1.3
4,422,466	+		Pf6N2E2_3796	0.24	-0.6
4,422,467	-		Pf6N2E2_3796	0.24	-2.9
4,422,517	+		Pf6N2E2_3796	0.29	-1.2
4,422,517	+		Pf6N2E2_3796	0.29	-0.2
4,422,517	+		Pf6N2E2_3796	0.29	-0.2
4,422,518	-		Pf6N2E2_3796	0.29	+0.9
4,422,518	-		Pf6N2E2_3796	0.29	-1.7
4,422,518	-		Pf6N2E2_3796	0.29	+1.2
4,422,541	+		Pf6N2E2_3796	0.32	+1.0
4,422,541	+		Pf6N2E2_3796	0.32	-0.9
4,422,541	+		Pf6N2E2_3796	0.32	-3.4
4,422,541	+		Pf6N2E2_3796	0.32	-2.8
4,422,541	+		Pf6N2E2_3796	0.32	-1.8
4,422,745	+		Pf6N2E2_3796	0.53	-2.9
4,422,746	-		Pf6N2E2_3796	0.53	-2.4
4,422,746	-		Pf6N2E2_3796	0.53	-0.2
4,422,746	-		Pf6N2E2_3796	0.53	-1.6
4,422,817	+		Pf6N2E2_3796	0.61	-1.0
4,422,817	+		Pf6N2E2_3796	0.61	-2.7
4,422,817	+		Pf6N2E2_3796	0.61	-1.3
4,422,817	+		Pf6N2E2_3796	0.61	+1.9
4,422,870	+		Pf6N2E2_3796	0.66	-0.6
4,422,871	-		Pf6N2E2_3796	0.67	-0.2
4,422,871	-		Pf6N2E2_3796	0.67	-0.5
4,422,931	+		Pf6N2E2_3796	0.73	+0.5