Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3417

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
3,966,655	-				+2.5
3,966,655	-				+0.3
3,966,655	-				-1.0
3,966,776	+				+1.9
3,966,798	-				+1.2
3,966,798	-				+0.0
3,966,903	-				-1.3
3,967,784	+				-3.3
3,967,805	+				-1.9
3,967,847	+				+1.5
3,967,847	+				+0.3
3,967,848	-				+0.4
3,967,848	-				+1.6
3,967,848	-				-0.2
3,967,848	-				+0.8
3,967,848	-				+2.4
3,967,848	-				+0.9
3,967,848	-				-1.7
3,967,848	-				-1.0
3,967,851	+				+0.5
3,967,852	-				-1.7
3,967,852	-				-1.6
3,967,852	-				+0.6
3,967,856	+				+1.7
3,967,856	+				+1.7
3,967,857	-				-2.9
3,967,896	+				-0.9
3,967,896	+				+1.8
3,967,897	-				+2.2
3,967,897	-				-0.2
3,967,946	-				-1.4
3,967,987	-		Pf6N2E2_3417	0.11	+1.6
3,968,021	-		Pf6N2E2_3417	0.12	+3.9
3,968,024	-		Pf6N2E2_3417	0.12	-1.5
3,968,065	-		Pf6N2E2_3417	0.13	-0.6
3,968,165	+		Pf6N2E2_3417	0.16	+0.9
3,968,165	+		Pf6N2E2_3417	0.16	-0.3
3,968,166	-		Pf6N2E2_3417	0.16	+0.7
3,968,166	-		Pf6N2E2_3417	0.16	-0.1
3,968,191	+		Pf6N2E2_3417	0.17	-2.3
3,968,191	+		Pf6N2E2_3417	0.17	+1.2
3,968,192	-		Pf6N2E2_3417	0.17	-1.8
3,968,192	-		Pf6N2E2_3417	0.17	+0.1
3,968,225	+		Pf6N2E2_3417	0.18	-2.9
3,968,242	+		Pf6N2E2_3417	0.19	-0.9
3,968,242	+		Pf6N2E2_3417	0.19	-1.5
3,968,242	+		Pf6N2E2_3417	0.19	+1.6
3,968,242	+		Pf6N2E2_3417	0.19	+0.7
3,968,243	-		Pf6N2E2_3417	0.19	+0.7
3,968,243	-		Pf6N2E2_3417	0.19	+0.7
3,968,243	-		Pf6N2E2_3417	0.19	+1.4
3,968,243	-		Pf6N2E2_3417	0.19	-1.1
3,968,243	-		Pf6N2E2_3417	0.19	-2.6
3,968,255	+		Pf6N2E2_3417	0.19	+1.7
3,968,255	+		Pf6N2E2_3417	0.19	+0.8
3,968,256	-		Pf6N2E2_3417	0.19	-1.9
3,968,281	+		Pf6N2E2_3417	0.20	+1.6
3,968,282	-		Pf6N2E2_3417	0.20	+0.5
3,968,301	-		Pf6N2E2_3417	0.21	+1.9
3,968,306	+		Pf6N2E2_3417	0.21	+0.2
3,968,307	-		Pf6N2E2_3417	0.21	+0.7
3,968,383	+		Pf6N2E2_3417	0.23	+1.0
3,968,383	+		Pf6N2E2_3417	0.23	+0.8
3,968,383	+		Pf6N2E2_3417	0.23	+2.0
3,968,384	-		Pf6N2E2_3417	0.23	+2.2
3,968,384	-		Pf6N2E2_3417	0.23	+0.2
3,968,384	-		Pf6N2E2_3417	0.23	-0.6
3,968,386	-		Pf6N2E2_3417	0.23	+0.7
3,968,426	-		Pf6N2E2_3417	0.24	+1.2
3,968,625	+		Pf6N2E2_3417	0.30	-2.5
3,968,636	+		Pf6N2E2_3417	0.31	+1.6
3,968,637	-		Pf6N2E2_3417	0.31	-1.1
3,968,637	-		Pf6N2E2_3417	0.31	+1.1
3,968,657	-		Pf6N2E2_3417	0.31	+0.7
3,968,706	-		Pf6N2E2_3417	0.33	+2.2
3,968,706	-		Pf6N2E2_3417	0.33	-0.3
3,968,777	+		Pf6N2E2_3417	0.35	+0.9
3,968,778	-		Pf6N2E2_3417	0.35	+2.2
3,968,778	-		Pf6N2E2_3417	0.35	-1.1
3,968,778	-		Pf6N2E2_3417	0.35	+0.7
3,968,778	-		Pf6N2E2_3417	0.35	-0.0
3,968,778	-		Pf6N2E2_3417	0.35	+1.5
3,968,876	-		Pf6N2E2_3417	0.38	-1.1
3,968,904	+		Pf6N2E2_3417	0.39	+3.3
3,968,904	+		Pf6N2E2_3417	0.39	+1.5
3,968,904	+		Pf6N2E2_3417	0.39	-2.1
3,968,905	-		Pf6N2E2_3417	0.39	-2.6
3,969,012	+		Pf6N2E2_3417	0.42	-0.0
3,969,120	+		Pf6N2E2_3417	0.46	-1.4
3,969,120	+		Pf6N2E2_3417	0.46	-1.1
3,969,121	-		Pf6N2E2_3417	0.46	-1.8
3,969,121	-		Pf6N2E2_3417	0.46	+0.7
3,969,147	-		Pf6N2E2_3417	0.46	+0.8
3,969,253	+		Pf6N2E2_3417	0.50	+0.9
3,969,253	+		Pf6N2E2_3417	0.50	+0.7
3,969,267	+		Pf6N2E2_3417	0.50	-0.8
3,969,267	+		Pf6N2E2_3417	0.50	-0.2
3,969,267	+		Pf6N2E2_3417	0.50	-0.1
3,969,268	-		Pf6N2E2_3417	0.50	+1.2
3,969,268	-		Pf6N2E2_3417	0.50	+0.8
3,969,268	-		Pf6N2E2_3417	0.50	-2.7
3,969,271	+		Pf6N2E2_3417	0.50	+0.6
3,969,271	+		Pf6N2E2_3417	0.50	-1.7
3,969,272	-		Pf6N2E2_3417	0.50	+0.2
3,969,272	-		Pf6N2E2_3417	0.50	+0.9
3,969,272	-		Pf6N2E2_3417	0.50	-2.9
3,969,272	-		Pf6N2E2_3417	0.50	+0.8
3,969,298	-		Pf6N2E2_3417	0.51	+2.1
3,969,345	+		Pf6N2E2_3417	0.52	+1.0
3,969,345	+		Pf6N2E2_3417	0.52	+1.8
3,969,371	-		Pf6N2E2_3417	0.53	+0.4
3,969,371	-		Pf6N2E2_3417	0.53	+0.9
3,969,371	-		Pf6N2E2_3417	0.53	+0.9
3,969,371	-		Pf6N2E2_3417	0.53	+2.3
3,969,371	-		Pf6N2E2_3417	0.53	-0.1
3,969,375	-		Pf6N2E2_3417	0.53	-2.0
3,969,512	-		Pf6N2E2_3417	0.58	-2.1
3,969,580	-		Pf6N2E2_3417	0.60	+0.7
3,969,591	+		Pf6N2E2_3417	0.60	+0.2
3,969,592	-		Pf6N2E2_3417	0.60	+2.4
3,969,592	-		Pf6N2E2_3417	0.60	+0.9
3,969,677	+		Pf6N2E2_3417	0.63	-1.3
3,969,678	-		Pf6N2E2_3417	0.63	-1.6
3,969,681	+		Pf6N2E2_3417	0.63	-3.3
3,969,682	-		Pf6N2E2_3417	0.63	-0.8
3,969,682	-		Pf6N2E2_3417	0.63	+1.7
3,969,682	-		Pf6N2E2_3417	0.63	+1.8
3,969,955	-		Pf6N2E2_3417	0.71	+2.3
3,969,993	+		Pf6N2E2_3417	0.72	-2.1
3,970,184	+		Pf6N2E2_3417	0.78	+0.2
3,970,185	-		Pf6N2E2_3417	0.78	-1.1
3,970,185	-		Pf6N2E2_3417	0.78	-1.3
3,970,185	-		Pf6N2E2_3417	0.78	+1.9
3,970,193	+		Pf6N2E2_3417	0.78	-1.1
3,970,245	-		Pf6N2E2_3417	0.80	-1.2
3,970,306	+		Pf6N2E2_3417	0.82	-1.0
3,970,306	+		Pf6N2E2_3417	0.82	+1.6
3,970,306	+		Pf6N2E2_3417	0.82	+2.1
3,970,306	+		Pf6N2E2_3417	0.82	+1.7
3,970,306	+		Pf6N2E2_3417	0.82	-1.6
3,970,307	-		Pf6N2E2_3417	0.82	+0.8
3,970,307	-		Pf6N2E2_3417	0.82	+2.9
3,970,383	+		Pf6N2E2_3417	0.84	+0.7
3,970,388	+		Pf6N2E2_3417	0.84	+2.0
3,970,389	-		Pf6N2E2_3417	0.84	-1.3
3,970,389	-		Pf6N2E2_3417	0.84	-0.4
3,970,389	-		Pf6N2E2_3417	0.84	+0.9
3,970,542	-		Pf6N2E2_3417	0.89	+0.1
3,970,671	+				+3.4
3,970,671	+				-1.1
3,970,671	+				-2.8
3,970,672	-				+1.6
3,970,672	-				-2.0
3,970,672	-				-1.0
3,970,672	-				+2.5
3,970,672	-				-1.4
3,970,755	+				-2.9
3,970,786	-				+0.2
3,970,786	-				-2.3
3,970,801	-				+1.5
3,970,867	-				+3.4
3,970,867	-				+1.6
3,970,876	-				+1.4
3,970,876	-				-2.2
3,970,878	+				+1.2
3,971,075	-				+1.4
3,971,228	-				+1.5
3,971,228	-				+1.0
3,971,318	-				+0.7
3,971,318	-				+1.3
3,971,318	-				-2.0
3,971,380	+		Pf6N2E2_3418	0.11	-4.2
3,971,380	+		Pf6N2E2_3418	0.11	+1.4
3,971,381	-		Pf6N2E2_3418	0.11	-0.7
3,971,437	+		Pf6N2E2_3418	0.12	+2.0
3,971,695	+		Pf6N2E2_3418	0.18	+2.4
3,971,695	+		Pf6N2E2_3418	0.18	-0.3
3,971,695	+		Pf6N2E2_3418	0.18	-0.4
3,971,696	-		Pf6N2E2_3418	0.18	-1.9
3,971,696	-		Pf6N2E2_3418	0.18	+1.6
3,971,696	-		Pf6N2E2_3418	0.18	-1.9
3,971,782	+		Pf6N2E2_3418	0.20	-0.9
3,971,782	+		Pf6N2E2_3418	0.20	+2.2
3,971,782	+		Pf6N2E2_3418	0.20	-1.5
3,971,782	+		Pf6N2E2_3418	0.20	+0.1
3,971,783	-		Pf6N2E2_3418	0.20	+0.3
3,971,783	-		Pf6N2E2_3418	0.20	+0.7
3,971,783	-		Pf6N2E2_3418	0.20	+1.6
3,971,783	-		Pf6N2E2_3418	0.20	-2.5
3,971,783	-		Pf6N2E2_3418	0.20	-1.0