Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2974

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
3,464,515	+		Pf6N2E2_2973	0.25	-1.1
3,464,525	-		Pf6N2E2_2973	0.27	+1.5
3,464,555	-		Pf6N2E2_2973	0.30	-0.2
3,464,665	+		Pf6N2E2_2973	0.41	+1.1
3,464,665	+		Pf6N2E2_2973	0.41	+2.0
3,464,665	+		Pf6N2E2_2973	0.41	-1.6
3,464,665	+		Pf6N2E2_2973	0.41	+1.1
3,464,666	-		Pf6N2E2_2973	0.41	+2.3
3,464,666	-		Pf6N2E2_2973	0.41	-1.6
3,464,666	-		Pf6N2E2_2973	0.41	+2.4
3,464,666	-		Pf6N2E2_2973	0.41	-2.1
3,465,023	-		Pf6N2E2_2973	0.79	+1.9
3,465,023	-		Pf6N2E2_2973	0.79	+4.1
3,465,314	+				-0.5
3,465,315	-				-1.8
3,465,315	-				-1.7
3,465,315	-				+1.4
3,465,316	+				-0.9
3,465,316	+				-2.1
3,465,316	+				+0.1
3,465,316	+				-0.7
3,465,317	-				+1.2
3,465,317	-				-2.1
3,465,317	-				-2.3
3,465,561	+		Pf6N2E2_2974	0.10	-1.9
3,465,561	+		Pf6N2E2_2974	0.10	+0.5
3,465,562	-		Pf6N2E2_2974	0.10	+1.1
3,465,562	-		Pf6N2E2_2974	0.10	-0.7
3,465,750	+		Pf6N2E2_2974	0.26	-1.3
3,465,750	+		Pf6N2E2_2974	0.26	-0.8
3,465,751	-		Pf6N2E2_2974	0.27	+2.6
3,465,751	-		Pf6N2E2_2974	0.27	+0.3
3,465,751	-		Pf6N2E2_2974	0.27	+0.4
3,465,751	-		Pf6N2E2_2974	0.27	-2.4
3,465,751	-		Pf6N2E2_2974	0.27	-3.5
3,466,180	-		Pf6N2E2_2974	0.63	+1.2
3,466,218	+		Pf6N2E2_2974	0.66	-3.1
3,466,219	-		Pf6N2E2_2974	0.66	-0.1
3,466,219	-		Pf6N2E2_2974	0.66	-2.0
3,466,261	-		Pf6N2E2_2974	0.70	+3.2
3,466,345	-		Pf6N2E2_2974	0.77	+2.7
3,466,359	+		Pf6N2E2_2974	0.78	-2.0
3,466,360	-		Pf6N2E2_2974	0.78	+1.8
3,466,363	+		Pf6N2E2_2974	0.79	+2.1
3,466,363	+		Pf6N2E2_2974	0.79	-2.0
3,466,489	+		Pf6N2E2_2974	0.89	+0.3
3,466,489	+		Pf6N2E2_2974	0.89	-2.5
3,466,489	+		Pf6N2E2_2974	0.89	+1.9
3,466,490	-		Pf6N2E2_2974	0.90	+0.7
3,466,490	-		Pf6N2E2_2974	0.90	+1.4
3,466,490	-		Pf6N2E2_2974	0.90	-2.7
3,466,501	+				-2.8
3,466,501	+				+0.4
3,466,505	+				+4.1
3,466,505	+				-3.3
3,466,505	+				-1.7
3,466,505	+				+0.5
3,466,506	-				-2.0
3,466,506	-				+0.8
3,466,518	+				-2.1
3,466,519	-				-2.3
3,466,519	-				+0.8
3,466,519	-				-1.8
3,466,541	+				-3.4
3,466,558	+				+1.0
3,466,558	+				+0.1
3,466,559	-				+1.8
3,466,559	-				-2.6
3,466,559	-				+1.2
3,466,559	-				-2.8
3,466,559	-				+1.5
3,466,560	+				+1.5
3,466,560	+				+0.1
3,466,560	+				-0.1
3,466,560	+				+1.5
3,466,562	+				+1.3
3,466,959	+				+0.9
3,466,989	+				+1.4
3,466,989	+				+0.7
3,466,989	+				+2.5
3,467,018	-				+0.8
3,467,030	+				-0.0
3,467,163	+				+0.2
3,467,163	+				+0.0
3,467,163	+				+1.4
3,467,163	+				+2.4
3,467,224	+				-0.7
3,467,225	-				+0.7
3,467,242	-				-0.4
3,467,264	-				-1.8
3,467,264	-				+2.4
3,467,264	-				+1.1
3,467,296	+				+2.3
3,467,296	+				+1.3
3,467,350	-				+1.1
3,467,350	-				-1.4
3,467,418	+				+0.5
3,467,419	-				-1.1
3,467,419	-				+0.2
3,467,419	-				+0.6
3,467,419	-				-1.3
3,467,441	+				-1.3
3,467,441	+				+0.8
3,467,590	+		Pf6N2E2_2975	0.10	-0.3