Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2456

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
2,906,510	+		Pf6N2E2_2454	0.51	+0.6
2,906,529	+		Pf6N2E2_2454	0.53	-2.1
2,906,530	-		Pf6N2E2_2454	0.53	+2.3
2,906,530	-		Pf6N2E2_2454	0.53	-0.3
2,906,530	-		Pf6N2E2_2454	0.53	+2.3
2,906,530	-		Pf6N2E2_2454	0.53	-1.0
2,906,647	+		Pf6N2E2_2454	0.63	+1.7
2,906,648	-		Pf6N2E2_2454	0.63	-1.5
2,906,748	+		Pf6N2E2_2454	0.71	-2.7
2,906,748	+		Pf6N2E2_2454	0.71	+0.4
2,906,748	+		Pf6N2E2_2454	0.71	-1.2
2,906,800	-		Pf6N2E2_2454	0.75	-1.0
2,906,800	-		Pf6N2E2_2454	0.75	+1.7
2,906,839	-		Pf6N2E2_2454	0.78	-1.5
2,906,851	+		Pf6N2E2_2454	0.79	-0.0
2,906,851	+		Pf6N2E2_2454	0.79	+0.4
2,906,852	-		Pf6N2E2_2454	0.79	-1.0
2,906,852	-		Pf6N2E2_2454	0.79	+0.2
2,906,852	-		Pf6N2E2_2454	0.79	+0.5
2,906,901	+		Pf6N2E2_2454	0.83	+0.1
2,906,902	-		Pf6N2E2_2454	0.83	-2.6
2,906,931	+		Pf6N2E2_2454	0.86	-0.5
2,906,931	+		Pf6N2E2_2454	0.86	-2.3
2,906,932	-		Pf6N2E2_2454	0.86	-1.0
2,906,932	-		Pf6N2E2_2454	0.86	+0.8
2,907,133	+				-1.7
2,907,134	-				+1.8
2,907,302	-		Pf6N2E2_2455	0.60	+0.6
2,907,360	+		Pf6N2E2_2455	0.86	-2.2
2,907,361	-		Pf6N2E2_2455	0.87	+0.7
2,907,366	+		Pf6N2E2_2455	0.89	-0.9
2,907,366	+		Pf6N2E2_2455	0.89	+1.8
2,907,366	+		Pf6N2E2_2455	0.89	+1.8
2,907,367	-		Pf6N2E2_2455	0.89	-2.3
2,907,367	-		Pf6N2E2_2455	0.89	-0.3
2,907,367	-		Pf6N2E2_2455	0.89	-0.9
2,907,367	-		Pf6N2E2_2455	0.89	+0.2
2,907,367	-		Pf6N2E2_2455	0.89	-0.5
2,907,367	-		Pf6N2E2_2455	0.89	+1.1
2,907,367	-		Pf6N2E2_2455	0.89	-1.6
2,907,367	-		Pf6N2E2_2455	0.89	+0.0
2,907,367	-		Pf6N2E2_2455	0.89	-2.3
2,907,371	-				+1.3
2,907,466	+				+3.1
2,907,467	-				-2.3
2,907,467	-				+1.3
2,907,497	-				-3.1
2,907,748	-		Pf6N2E2_2456	0.33	-2.9
2,907,802	+		Pf6N2E2_2456	0.39	-0.0
2,908,117	+		Pf6N2E2_2456	0.74	-0.4
2,908,117	+		Pf6N2E2_2456	0.74	-1.4
2,908,117	+		Pf6N2E2_2456	0.74	+1.2
2,908,117	+		Pf6N2E2_2456	0.74	-0.5
2,908,118	-		Pf6N2E2_2456	0.75	+0.8
2,908,118	-		Pf6N2E2_2456	0.75	-1.8
2,908,118	-		Pf6N2E2_2456	0.75	-1.0
2,908,281	+				+0.7
2,908,340	-				+1.3
2,908,503	+		Pf6N2E2_2457	0.23	+0.5
2,908,503	+		Pf6N2E2_2457	0.23	+1.7
2,908,503	+		Pf6N2E2_2457	0.23	+3.2
2,908,504	-		Pf6N2E2_2457	0.23	-2.0
2,908,504	-		Pf6N2E2_2457	0.23	+0.3
2,908,504	-		Pf6N2E2_2457	0.23	-2.0
2,908,740	+		Pf6N2E2_2457	0.55	+0.6
2,908,740	+		Pf6N2E2_2457	0.55	+0.7
2,908,740	+		Pf6N2E2_2457	0.55	+1.5
2,908,741	-		Pf6N2E2_2457	0.55	+0.8
2,908,741	-		Pf6N2E2_2457	0.55	+0.6
2,908,741	-		Pf6N2E2_2457	0.55	-0.2
2,908,741	-		Pf6N2E2_2457	0.55	-0.3
2,909,114	+				+1.0
2,909,114	+				-0.2
2,909,114	+				-3.1
2,909,115	-				-0.3
2,909,115	-				-1.3
2,909,115	-				+0.4
2,909,141	+				-0.6
2,909,141	+				-3.3
2,909,141	+				+2.4
2,909,141	+				-1.5
2,909,142	-				-2.3
2,909,142	-				+2.7
2,909,142	-				-1.9
2,909,142	-				-0.2
2,909,158	-				-1.1
2,909,193	+				-1.9