Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2173

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
2,577,440	-		Pf6N2E2_2172	0.19	+0.4
2,577,440	-		Pf6N2E2_2172	0.19	-2.7
2,577,601	+		Pf6N2E2_2172	0.35	-0.6
2,577,601	+		Pf6N2E2_2172	0.35	-2.1
2,577,695	-		Pf6N2E2_2172	0.45	+1.4
2,577,711	+		Pf6N2E2_2172	0.47	+0.2
2,577,711	+		Pf6N2E2_2172	0.47	+1.0
2,577,712	-		Pf6N2E2_2172	0.47	-1.8
2,577,712	-		Pf6N2E2_2172	0.47	+0.8
2,577,712	-		Pf6N2E2_2172	0.47	+2.1
2,577,712	-		Pf6N2E2_2172	0.47	+0.5
2,577,792	+		Pf6N2E2_2172	0.55	+0.2
2,577,792	+		Pf6N2E2_2172	0.55	+0.4
2,577,793	-		Pf6N2E2_2172	0.55	-2.4
2,577,848	+		Pf6N2E2_2172	0.61	-1.5
2,577,848	+		Pf6N2E2_2172	0.61	+1.4
2,577,848	+		Pf6N2E2_2172	0.61	-1.1
2,577,849	-		Pf6N2E2_2172	0.61	+0.9
2,578,151	+				+1.5
2,578,404	+				+1.7
2,578,404	+				-0.3
2,578,404	+				+0.2
2,578,404	+				-0.2
2,578,404	+				-0.4
2,578,404	+				+2.0
2,578,404	+				-2.0
2,578,404	+				-0.7
2,578,404	+				-1.7
2,578,404	+				-0.3
2,578,404	+				+0.2
2,578,404	+				-0.6
2,578,404	+				+1.7
2,578,404	+				-1.4
2,578,405	-				+0.0
2,578,405	-				-1.0
2,578,405	-				-2.3
2,578,405	-				+1.7
2,578,405	-				-0.5
2,578,405	-				-1.4
2,578,405	-				+2.9
2,578,408	+				+0.4
2,578,408	+				+1.0
2,578,409	-				+0.4
2,578,518	+		Pf6N2E2_2173	0.18	-0.4
2,578,518	+		Pf6N2E2_2173	0.18	-1.1
2,578,518	+		Pf6N2E2_2173	0.18	-2.9
2,578,519	-		Pf6N2E2_2173	0.18	+1.4
2,578,519	-		Pf6N2E2_2173	0.18	-0.0
2,578,519	-		Pf6N2E2_2173	0.18	+0.9
2,578,519	-		Pf6N2E2_2173	0.18	+1.3
2,578,519	-		Pf6N2E2_2173	0.18	+0.8
2,578,519	-		Pf6N2E2_2173	0.18	-0.4
2,578,519	-		Pf6N2E2_2173	0.18	-0.3
2,578,530	+		Pf6N2E2_2173	0.19	+2.6
2,578,530	+		Pf6N2E2_2173	0.19	-0.4
2,578,530	+		Pf6N2E2_2173	0.19	-1.4
2,578,531	-		Pf6N2E2_2173	0.19	+0.7
2,578,531	-		Pf6N2E2_2173	0.19	+1.1
2,578,531	-		Pf6N2E2_2173	0.19	+1.1
2,578,531	-		Pf6N2E2_2173	0.19	+0.9
2,578,531	-		Pf6N2E2_2173	0.19	-0.3
2,578,531	-		Pf6N2E2_2173	0.19	+2.3
2,578,681	+		Pf6N2E2_2173	0.39	-1.0
2,578,681	+		Pf6N2E2_2173	0.39	-3.1
2,578,682	-		Pf6N2E2_2173	0.39	-0.8
2,578,783	+		Pf6N2E2_2173	0.53	+1.0
2,578,791	+		Pf6N2E2_2173	0.54	+0.7
2,578,791	+		Pf6N2E2_2173	0.54	+0.2
2,578,791	+		Pf6N2E2_2173	0.54	+1.3
2,578,791	+		Pf6N2E2_2173	0.54	+0.7
2,578,792	-		Pf6N2E2_2173	0.54	+3.2
2,578,792	-		Pf6N2E2_2173	0.54	+0.0
2,578,911	+		Pf6N2E2_2173	0.70	+0.7
2,578,911	+		Pf6N2E2_2173	0.70	+1.0
2,578,911	+		Pf6N2E2_2173	0.70	-0.5
2,578,912	-		Pf6N2E2_2173	0.70	+1.3
2,578,912	-		Pf6N2E2_2173	0.70	+0.7
2,578,945	-		Pf6N2E2_2173	0.74	-0.2
2,578,963	-		Pf6N2E2_2173	0.76	-1.8
2,578,963	-		Pf6N2E2_2173	0.76	+0.7
2,578,980	+		Pf6N2E2_2173	0.79	+2.2
2,578,981	-		Pf6N2E2_2173	0.79	+0.4
2,578,981	-		Pf6N2E2_2173	0.79	+1.3
2,579,768	+				+1.8
2,579,768	+				-1.8
2,579,768	+				-0.8
2,579,768	+				-0.7
2,579,768	+				+1.4
2,579,768	+				-0.2
2,579,768	+				-3.4
2,579,769	-				-1.1
2,579,769	-				-2.4
2,579,769	-				+1.6
2,579,769	-				-0.8
2,579,769	-				-0.8
2,579,769	-				-1.6
2,579,769	-				+2.0
2,579,769	-				-1.8
2,579,769	-				+0.8
2,579,769	-				+0.8
2,579,784	+				-3.2
2,579,786	+				+1.0
2,579,786	+				-1.9
2,579,786	+				+2.4
2,579,786	+				+0.2
2,579,787	-				+0.4
2,579,798	+				-1.2
2,579,798	+				-1.1
2,579,799	-				-0.2
2,579,799	-				-1.4
2,579,799	-				+1.0
2,579,799	-				-1.6
2,579,818	+				+0.8
2,579,819	-				-2.6
2,579,851	+				+0.7
2,579,860	+				+1.8
2,579,861	-				-1.8
2,579,881	+				+1.8
2,579,881	+				+0.9
2,579,881	+				+0.2
2,579,882	-				+1.5
2,579,882	-				-3.3
2,579,923	+				-2.2
2,579,924	-				-0.8
2,579,924	-				-2.3
2,579,942	-				-0.6
2,579,942	-				+2.2
2,579,942	-				+0.4
2,579,951	+				+1.6
2,579,955	+				+0.9
2,579,955	+				-0.2
2,579,956	-				-1.9
2,579,956	-				-2.3
2,579,959	+				-1.6
2,579,960	-				-1.2
2,579,975	+				-0.6
2,579,976	-				+2.6