Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2157

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
2,560,446	+		Pf6N2E2_2155	0.33	-0.6
2,560,586	+		Pf6N2E2_2155	0.82	+0.8
2,560,586	+		Pf6N2E2_2155	0.82	-0.5
2,560,587	-		Pf6N2E2_2155	0.82	-2.2
2,560,678	+				+0.3
2,560,678	+				+1.5
2,560,678	+				-3.0
2,560,678	+				+0.5
2,560,679	-				+1.1
2,560,679	-				-1.1
2,560,679	-				+0.4
2,560,682	+				+1.9
2,560,682	+				-0.0
2,560,682	+				+2.0
2,560,682	+				-3.6
2,560,682	+				+0.3
2,560,682	+				-0.0
2,560,682	+				-1.1
2,560,682	+				-2.2
2,560,682	+				+0.9
2,560,683	-				+0.6
2,560,683	-				-1.4
2,560,683	-				-2.2
2,560,683	-				-0.5
2,560,683	-				+0.8
2,560,683	-				+2.0
2,560,683	-				+2.8
2,560,683	-				-3.7
2,560,694	+				+0.9
2,560,694	+				+1.2
2,560,694	+				+1.9
2,560,694	+				+0.3
2,561,154	-		Pf6N2E2_2156	0.68	-3.3
2,561,159	-		Pf6N2E2_2156	0.69	+0.5
2,561,331	+				+1.1
2,561,362	-				-1.7
2,561,381	-				-2.9
2,561,424	+				-1.5
2,561,902	+		Pf6N2E2_2157	0.49	-1.6
2,561,952	+		Pf6N2E2_2157	0.55	-0.8
2,561,952	+		Pf6N2E2_2157	0.55	-1.3
2,561,953	-		Pf6N2E2_2157	0.55	-0.1
2,561,953	-		Pf6N2E2_2157	0.55	-1.2
2,561,953	-		Pf6N2E2_2157	0.55	-0.2
2,561,953	-		Pf6N2E2_2157	0.55	+0.9
2,561,953	-		Pf6N2E2_2157	0.55	-2.2
2,562,231	+		Pf6N2E2_2157	0.85	-3.1
2,562,231	+		Pf6N2E2_2157	0.85	+0.5
2,562,231	+		Pf6N2E2_2157	0.85	+0.2
2,562,232	-		Pf6N2E2_2157	0.85	-0.5
2,562,232	-		Pf6N2E2_2157	0.85	-1.1
2,562,232	-		Pf6N2E2_2157	0.85	+0.6
2,562,232	-		Pf6N2E2_2157	0.85	-1.2
2,562,259	-		Pf6N2E2_2157	0.88	-0.8
2,562,524	+				-1.9
2,562,525	-				+1.1
2,562,738	+		Pf6N2E2_2158	0.39	-0.3
2,562,738	+		Pf6N2E2_2158	0.39	+0.8
2,562,738	+		Pf6N2E2_2158	0.39	+1.6
2,562,738	+		Pf6N2E2_2158	0.39	+0.2
2,562,738	+		Pf6N2E2_2158	0.39	-2.2
2,562,739	-		Pf6N2E2_2158	0.39	+0.6
2,562,739	-		Pf6N2E2_2158	0.39	-3.0
2,562,739	-		Pf6N2E2_2158	0.39	-3.0
2,562,739	-		Pf6N2E2_2158	0.39	-1.5
2,562,739	-		Pf6N2E2_2158	0.39	-2.4
2,562,739	-		Pf6N2E2_2158	0.39	-1.2
2,563,274	-		Pf6N2E2_2159	0.20	+0.8
2,563,312	-		Pf6N2E2_2159	0.25	+0.3
2,563,312	-		Pf6N2E2_2159	0.25	-1.6