Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2024

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
2,411,667	+		Pf6N2E2_2022	0.46	-1.0
2,411,667	+		Pf6N2E2_2022	0.46	-3.2
2,411,667	+		Pf6N2E2_2022	0.46	-1.0
2,411,667	+		Pf6N2E2_2022	0.46	-2.0
2,411,667	+		Pf6N2E2_2022	0.46	-1.7
2,411,668	-		Pf6N2E2_2022	0.46	-0.1
2,411,668	-		Pf6N2E2_2022	0.46	-0.0
2,411,951	+				-3.8
2,411,951	+				-0.2
2,411,952	-				+0.3
2,411,986	+				-2.2
2,411,986	+				-2.4
2,411,987	-				-2.0
2,411,987	-				-1.3
2,412,032	-				+0.9
2,412,083	-				-2.5
2,412,106	-				+0.7
2,412,122	+				-1.3
2,412,122	+				+0.4
2,412,123	-				+0.2
2,412,238	+		Pf6N2E2_2023	0.17	+0.6
2,412,238	+		Pf6N2E2_2023	0.17	-0.9
2,412,238	+		Pf6N2E2_2023	0.17	+1.6
2,412,239	-		Pf6N2E2_2023	0.17	+1.6
2,412,366	+		Pf6N2E2_2023	0.46	+0.7
2,412,385	+		Pf6N2E2_2023	0.51	+2.4
2,412,385	+		Pf6N2E2_2023	0.51	+1.3
2,412,385	+		Pf6N2E2_2023	0.51	+1.0
2,412,385	+		Pf6N2E2_2023	0.51	+1.2
2,412,385	+		Pf6N2E2_2023	0.51	+1.0
2,412,386	-		Pf6N2E2_2023	0.51	+2.0
2,412,386	-		Pf6N2E2_2023	0.51	-1.5
2,412,386	-		Pf6N2E2_2023	0.51	-1.7
2,412,386	-		Pf6N2E2_2023	0.51	+1.8
2,412,386	-		Pf6N2E2_2023	0.51	+1.6
2,412,386	-		Pf6N2E2_2023	0.51	+0.8
2,412,520	+		Pf6N2E2_2023	0.82	-1.4
2,412,520	+		Pf6N2E2_2023	0.82	-2.2
2,412,520	+		Pf6N2E2_2023	0.82	+0.7
2,412,521	-		Pf6N2E2_2023	0.82	+1.6
2,412,812	+		Pf6N2E2_2024	0.27	+0.9
2,412,813	-		Pf6N2E2_2024	0.27	+1.2
2,412,813	-		Pf6N2E2_2024	0.27	+1.6
2,412,813	-		Pf6N2E2_2024	0.27	-0.6
2,412,842	+		Pf6N2E2_2024	0.31	-1.2
2,412,842	+		Pf6N2E2_2024	0.31	-1.7
2,412,875	+		Pf6N2E2_2024	0.35	-3.0
2,412,876	-		Pf6N2E2_2024	0.35	-2.5
2,412,876	-		Pf6N2E2_2024	0.35	-0.7
2,412,876	-		Pf6N2E2_2024	0.35	+0.5
2,412,882	+		Pf6N2E2_2024	0.36	-0.2
2,413,038	-		Pf6N2E2_2024	0.57	-0.7
2,413,038	-		Pf6N2E2_2024	0.57	+1.0
2,413,246	+		Pf6N2E2_2024	0.84	-2.1
2,413,409	+				-0.7
2,413,410	-				-1.8
2,413,490	+				+0.5
2,413,490	+				+0.8
2,413,493	+				+1.9
2,413,493	+				+0.5
2,413,493	+				+0.9
2,413,494	-				-1.9
2,413,494	-				-1.0
2,413,494	-				+1.7
2,413,494	-				+2.0
2,413,494	-				-3.2
2,413,617	+				+0.7
2,413,790	+				-0.0
2,413,790	+				-1.4
2,413,791	-				+1.3
2,413,791	-				+1.9
2,413,799	+				-0.8
2,413,799	+				+0.9
2,413,799	+				+3.1
2,413,799	+				+1.2
2,413,799	+				+1.1
2,413,800	-				-0.2
2,413,800	-				+0.5
2,413,800	-				-2.0
2,413,800	-				-2.5
2,413,800	-				-1.2
2,413,800	-				+1.8
2,413,800	-				+0.7
2,413,835	-				+0.6
2,413,879	+				-2.5
2,413,934	+				+0.4
2,413,934	+				+1.4
2,413,934	+				-1.1
2,413,935	-				+0.1
2,414,219	+		Pf6N2E2_2025	0.22	+1.2
2,414,286	-		Pf6N2E2_2025	0.28	-2.0
2,414,286	-		Pf6N2E2_2025	0.28	+1.1
2,414,330	+		Pf6N2E2_2025	0.32	+0.9