Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1979

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
2,344,124	+		Pf6N2E2_1978	0.17	-2.4
2,344,152	+		Pf6N2E2_1978	0.23	-2.3
2,344,153	-		Pf6N2E2_1978	0.23	+1.6
2,344,153	-		Pf6N2E2_1978	0.23	-1.9
2,344,158	+		Pf6N2E2_1978	0.24	-2.7
2,344,159	-		Pf6N2E2_1978	0.24	-0.0
2,344,159	-		Pf6N2E2_1978	0.24	+1.3
2,344,159	-		Pf6N2E2_1978	0.24	+1.1
2,344,159	-		Pf6N2E2_1978	0.24	-1.8
2,344,159	-		Pf6N2E2_1978	0.24	-1.9
2,344,659	-				-2.3
2,344,659	-				-1.8
2,344,749	+				+0.7
2,344,749	+				+1.2
2,344,749	+				-1.4
2,344,750	-				-0.1
2,344,750	-				+1.4
2,344,750	-				-3.5
2,344,750	-				-2.1
2,345,048	+				+2.6
2,345,101	-				+1.4
2,345,130	+				-2.3
2,345,131	-				-1.4
2,345,175	+		Pf6N2E2_1979	0.12	-0.4
2,345,176	-		Pf6N2E2_1979	0.12	-0.6
2,345,180	-		Pf6N2E2_1979	0.13	-0.1
2,345,180	-		Pf6N2E2_1979	0.13	+1.4
2,345,650	-		Pf6N2E2_1979	0.50	-1.4
2,345,701	-		Pf6N2E2_1979	0.54	-0.4
2,345,745	+		Pf6N2E2_1979	0.58	-1.8
2,345,745	+		Pf6N2E2_1979	0.58	+1.3
2,345,745	+		Pf6N2E2_1979	0.58	-1.6
2,345,746	-		Pf6N2E2_1979	0.58	-0.0
2,345,746	-		Pf6N2E2_1979	0.58	-0.2
2,345,746	-		Pf6N2E2_1979	0.58	-0.8
2,345,746	-		Pf6N2E2_1979	0.58	+2.1
2,345,919	+		Pf6N2E2_1979	0.71	+0.6
2,345,920	-		Pf6N2E2_1979	0.72	-1.9
2,345,920	-		Pf6N2E2_1979	0.72	+1.1
2,346,023	+		Pf6N2E2_1979	0.80	-2.8
2,346,023	+		Pf6N2E2_1979	0.80	-1.6
2,346,024	-		Pf6N2E2_1979	0.80	-0.2
2,346,024	-		Pf6N2E2_1979	0.80	-0.9
2,346,024	-		Pf6N2E2_1979	0.80	-3.1
2,346,024	-		Pf6N2E2_1979	0.80	+2.0
2,346,150	+		Pf6N2E2_1979	0.90	+0.8
2,346,150	+		Pf6N2E2_1979	0.90	+0.7
2,346,211	+				-1.9
2,346,237	+				-1.3
2,346,237	+				+1.8
2,346,237	+				+1.7
2,346,238	-				-3.8
2,346,319	+				-0.6
2,346,319	+				+1.0
2,346,319	+				-0.4
2,346,455	+				+0.6
2,346,527	-		Pf6N2E2_1980	0.11	-2.4
2,346,557	-		Pf6N2E2_1980	0.19	-2.4
2,346,559	+		Pf6N2E2_1980	0.19	-2.2
2,346,559	+		Pf6N2E2_1980	0.19	+1.1
2,346,560	-		Pf6N2E2_1980	0.19	+0.0
2,346,617	+		Pf6N2E2_1980	0.33	+2.4
2,346,634	+		Pf6N2E2_1980	0.38	-1.9
2,346,732	+		Pf6N2E2_1980	0.62	+1.3
2,346,735	+		Pf6N2E2_1980	0.62	+0.4
2,346,736	-		Pf6N2E2_1980	0.63	-0.0
2,346,736	-		Pf6N2E2_1980	0.63	-2.0
2,346,738	+		Pf6N2E2_1980	0.63	+0.8
2,346,738	+		Pf6N2E2_1980	0.63	+0.9
2,346,738	+		Pf6N2E2_1980	0.63	-3.2
2,346,738	+		Pf6N2E2_1980	0.63	+2.2
2,346,738	+		Pf6N2E2_1980	0.63	-0.3
2,346,739	-		Pf6N2E2_1980	0.63	+1.2
2,346,828	+		Pf6N2E2_1980	0.85	-2.7
2,346,850	+				-0.5
2,346,850	+				-2.1
2,346,872	+				+0.5
2,346,873	-				-1.4
2,346,884	+				-1.6
2,347,036	+				-2.1
2,347,066	+		Pf6N2E2_1981	0.12	-1.6
2,347,115	+		Pf6N2E2_1981	0.22	-1.1
2,347,115	+		Pf6N2E2_1981	0.22	+0.5
2,347,116	-		Pf6N2E2_1981	0.22	+1.1
2,347,205	+		Pf6N2E2_1981	0.41	-2.8