Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1683

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,989,794	+		Pf6N2E2_1681	0.72	-0.7
1,989,794	+		Pf6N2E2_1681	0.72	+0.9
1,989,795	-		Pf6N2E2_1681	0.72	+2.6
1,989,855	+		Pf6N2E2_1681	0.77	-1.3
1,989,856	-		Pf6N2E2_1681	0.77	+2.6
1,989,856	-		Pf6N2E2_1681	0.77	+0.1
1,990,049	+				+1.5
1,990,050	-				-2.4
1,990,050	-				-1.1
1,990,050	-				+0.3
1,990,055	+				-0.5
1,990,055	+				+2.8
1,990,055	+				-0.9
1,990,056	-				-1.9
1,990,056	-				-0.5
1,990,076	+				+0.4
1,990,077	-				+2.0
1,990,115	-				+0.6
1,990,283	+		Pf6N2E2_1682	0.11	+0.1
1,990,421	+		Pf6N2E2_1682	0.38	-2.0
1,990,422	-		Pf6N2E2_1682	0.38	-2.7
1,990,422	-		Pf6N2E2_1682	0.38	+0.4
1,990,646	+		Pf6N2E2_1682	0.81	+1.5
1,990,697	+				+0.4
1,990,698	-				-2.6
1,991,170	-		Pf6N2E2_1683	0.44	-2.1
1,991,349	+		Pf6N2E2_1683	0.62	-3.4
1,991,733	-				-0.7
1,992,090	-				+1.2
1,992,118	-		Pf6N2E2_1684	0.11	-1.9
1,992,165	-		Pf6N2E2_1684	0.13	-2.9
1,992,244	+		Pf6N2E2_1684	0.16	-1.8
1,992,335	+		Pf6N2E2_1684	0.20	+1.3
1,992,335	+		Pf6N2E2_1684	0.20	+0.4
1,992,336	-		Pf6N2E2_1684	0.20	-0.3
1,992,336	-		Pf6N2E2_1684	0.20	+0.9
1,992,507	-		Pf6N2E2_1684	0.27	-2.3
1,992,507	-		Pf6N2E2_1684	0.27	-0.8
1,992,543	-		Pf6N2E2_1684	0.29	-1.1
1,992,588	-		Pf6N2E2_1684	0.30	-1.3