Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1679

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,984,624	+		Pf6N2E2_1678	0.34	-0.2
1,984,687	+		Pf6N2E2_1678	0.39	-1.7
1,984,687	+		Pf6N2E2_1678	0.39	-1.1
1,984,688	-		Pf6N2E2_1678	0.39	-1.5
1,984,750	+		Pf6N2E2_1678	0.43	+2.0
1,984,761	+		Pf6N2E2_1678	0.44	+1.8
1,984,761	+		Pf6N2E2_1678	0.44	+0.9
1,984,761	+		Pf6N2E2_1678	0.44	-2.8
1,984,762	-		Pf6N2E2_1678	0.44	-0.1
1,984,769	+		Pf6N2E2_1678	0.45	-2.6
1,984,769	+		Pf6N2E2_1678	0.45	-2.2
1,984,769	+		Pf6N2E2_1678	0.45	+1.2
1,984,769	+		Pf6N2E2_1678	0.45	-0.8
1,984,769	+		Pf6N2E2_1678	0.45	-1.3
1,984,770	-		Pf6N2E2_1678	0.45	+1.1
1,984,776	+		Pf6N2E2_1678	0.46	-0.1
1,984,776	+		Pf6N2E2_1678	0.46	+2.1
1,984,776	+		Pf6N2E2_1678	0.46	+1.1
1,984,776	+		Pf6N2E2_1678	0.46	-1.2
1,984,817	+		Pf6N2E2_1678	0.49	+0.5
1,984,817	+		Pf6N2E2_1678	0.49	+2.0
1,984,818	-		Pf6N2E2_1678	0.49	-2.3
1,984,891	+		Pf6N2E2_1678	0.55	-1.8
1,984,892	-		Pf6N2E2_1678	0.55	+3.1
1,984,892	-		Pf6N2E2_1678	0.55	+1.5
1,984,892	-		Pf6N2E2_1678	0.55	-2.5
1,984,892	-		Pf6N2E2_1678	0.55	-0.5
1,984,928	+		Pf6N2E2_1678	0.57	-1.2
1,984,932	+		Pf6N2E2_1678	0.58	+0.0
1,984,933	-		Pf6N2E2_1678	0.58	-2.0
1,985,162	+		Pf6N2E2_1678	0.76	+1.4
1,985,228	-		Pf6N2E2_1678	0.81	+0.5
1,985,304	+		Pf6N2E2_1678	0.87	+1.9
1,985,427	+				-3.0
1,985,462	+				+0.5
1,985,463	-				-1.3
1,985,463	-				-1.4
1,985,466	+				+0.9
1,985,466	+				+1.5
1,985,466	+				-0.7
1,985,466	+				-2.0
1,985,466	+				+0.5
1,985,467	-				-0.1
1,985,467	-				+1.7
1,985,467	-				+0.2
1,985,477	+				+2.4
1,985,477	+				+1.3
1,985,477	+				+1.4
1,985,477	+				-1.2
1,985,478	-				-2.1
1,985,478	-				+0.9
1,985,478	-				+1.5
1,985,478	-				+1.7
1,985,481	+				+1.0
1,985,481	+				-0.6
1,985,481	+				-0.4
1,985,481	+				-1.6
1,985,481	+				+1.1
1,985,481	+				-3.2
1,985,481	+				-0.5
1,985,481	+				+1.9
1,985,481	+				+1.6
1,985,481	+				+2.5
1,985,481	+				+0.3
1,985,481	+				-1.2
1,985,481	+				-0.4
1,985,481	+				+0.5
1,985,482	-				+2.9
1,985,482	-				+1.2
1,985,524	-				-1.0
1,985,627	+				+0.3
1,985,627	+				-0.7
1,985,627	+				+0.9
1,985,627	+				+0.6
1,985,628	-				-0.8
1,985,768	+		Pf6N2E2_1679	0.20	+0.2
1,985,769	-		Pf6N2E2_1679	0.20	-0.1
1,985,771	+		Pf6N2E2_1679	0.20	-0.5
1,985,771	+		Pf6N2E2_1679	0.20	+1.2
1,985,771	+		Pf6N2E2_1679	0.20	-2.7
1,985,771	+		Pf6N2E2_1679	0.20	+0.5
1,985,826	-		Pf6N2E2_1679	0.27	-1.7
1,985,826	-		Pf6N2E2_1679	0.27	+1.0
1,985,871	-		Pf6N2E2_1679	0.33	-2.1
1,985,940	+		Pf6N2E2_1679	0.42	-1.3
1,985,940	+		Pf6N2E2_1679	0.42	+2.8
1,985,941	-		Pf6N2E2_1679	0.42	-0.1
1,986,054	+		Pf6N2E2_1679	0.57	-1.1
1,986,054	+		Pf6N2E2_1679	0.57	-3.0
1,986,054	+		Pf6N2E2_1679	0.57	-1.5
1,986,055	-		Pf6N2E2_1679	0.57	-0.8
1,986,185	+		Pf6N2E2_1679	0.73	-0.6
1,986,185	+		Pf6N2E2_1679	0.73	+0.7
1,986,185	+		Pf6N2E2_1679	0.73	-0.8
1,986,186	-		Pf6N2E2_1679	0.74	-1.1
1,986,186	-		Pf6N2E2_1679	0.74	+0.5
1,986,509	-				+2.0
1,986,661	+				+0.6
1,986,662	-				+0.5
1,986,676	+		Pf6N2E2_1680	0.10	-0.8
1,986,770	+		Pf6N2E2_1680	0.15	+3.1
1,986,771	-		Pf6N2E2_1680	0.15	-1.5
1,986,771	-		Pf6N2E2_1680	0.15	+0.6
1,986,994	+		Pf6N2E2_1680	0.25	+2.2
1,986,995	-		Pf6N2E2_1680	0.25	+0.2
1,986,995	-		Pf6N2E2_1680	0.25	-0.3
1,987,027	+		Pf6N2E2_1680	0.26	+1.0
1,987,027	+		Pf6N2E2_1680	0.26	+0.7
1,987,028	-		Pf6N2E2_1680	0.26	+0.7
1,987,099	+		Pf6N2E2_1680	0.29	+0.8
1,987,099	+		Pf6N2E2_1680	0.29	-0.1
1,987,099	+		Pf6N2E2_1680	0.29	+3.0
1,987,099	+		Pf6N2E2_1680	0.29	-1.2
1,987,099	+		Pf6N2E2_1680	0.29	+1.8
1,987,099	+		Pf6N2E2_1680	0.29	-1.4
1,987,099	+		Pf6N2E2_1680	0.29	+0.0
1,987,100	-		Pf6N2E2_1680	0.29	-1.0
1,987,100	-		Pf6N2E2_1680	0.29	+1.3
1,987,100	-		Pf6N2E2_1680	0.29	+0.5
1,987,100	-		Pf6N2E2_1680	0.29	+1.5
1,987,105	+		Pf6N2E2_1680	0.30	+1.9
1,987,105	+		Pf6N2E2_1680	0.30	-2.0
1,987,106	-		Pf6N2E2_1680	0.30	-0.5
1,987,106	-		Pf6N2E2_1680	0.30	+0.4
1,987,106	-		Pf6N2E2_1680	0.30	-1.1
1,987,106	-		Pf6N2E2_1680	0.30	+2.3
1,987,106	-		Pf6N2E2_1680	0.30	-1.9
1,987,109	-		Pf6N2E2_1680	0.30	-1.1
1,987,109	-		Pf6N2E2_1680	0.30	+1.3
1,987,204	+		Pf6N2E2_1680	0.34	+0.7
1,987,204	+		Pf6N2E2_1680	0.34	-2.1
1,987,205	-		Pf6N2E2_1680	0.34	-2.0
1,987,369	+		Pf6N2E2_1680	0.41	+2.3
1,987,369	+		Pf6N2E2_1680	0.41	-1.9
1,987,370	-		Pf6N2E2_1680	0.42	+0.8
1,987,370	-		Pf6N2E2_1680	0.42	-0.5
1,987,370	-		Pf6N2E2_1680	0.42	-0.7
1,987,386	-		Pf6N2E2_1680	0.42	+0.3