Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1668

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,973,865	-		Pf6N2E2_1667	0.41	+0.6
1,974,224	-		Pf6N2E2_1667	0.72	-1.9
1,974,525	-				+0.6
1,974,582	+				-1.7
1,974,583	-				+0.9
1,974,583	-				-0.1
1,974,679	+				+1.9
1,974,691	+				-3.9
1,974,700	+				-1.9
1,974,701	-				-0.5
1,974,701	-				-0.9
1,974,919	+		Pf6N2E2_1668	0.18	-2.9
1,974,920	-		Pf6N2E2_1668	0.18	-1.9
1,974,920	-		Pf6N2E2_1668	0.18	-1.6
1,974,949	+		Pf6N2E2_1668	0.19	+0.8
1,975,106	+		Pf6N2E2_1668	0.28	-0.8
1,975,106	+		Pf6N2E2_1668	0.28	-2.8
1,975,106	+		Pf6N2E2_1668	0.28	-1.7
1,975,106	+		Pf6N2E2_1668	0.28	+1.3
1,975,206	+		Pf6N2E2_1668	0.34	+0.6
1,975,207	-		Pf6N2E2_1668	0.34	-1.3
1,975,315	+		Pf6N2E2_1668	0.40	+2.6
1,975,315	+		Pf6N2E2_1668	0.40	+0.6
1,975,315	+		Pf6N2E2_1668	0.40	+1.2
1,975,316	-		Pf6N2E2_1668	0.40	-0.5
1,975,556	-		Pf6N2E2_1668	0.54	+0.2
1,975,556	-		Pf6N2E2_1668	0.54	-1.7
1,975,825	+		Pf6N2E2_1668	0.69	+0.3
1,975,825	+		Pf6N2E2_1668	0.69	-1.7
1,975,825	+		Pf6N2E2_1668	0.69	+0.2
1,975,826	-		Pf6N2E2_1668	0.69	-0.9
1,975,826	-		Pf6N2E2_1668	0.69	-1.3
1,975,826	-		Pf6N2E2_1668	0.69	-0.4
1,975,851	+		Pf6N2E2_1668	0.70	+1.8
1,975,852	-		Pf6N2E2_1668	0.70	-2.9
1,975,852	-		Pf6N2E2_1668	0.70	+0.5
1,975,874	+		Pf6N2E2_1668	0.71	+0.7
1,975,874	+		Pf6N2E2_1668	0.71	-2.0
1,975,894	+		Pf6N2E2_1668	0.72	-1.3
1,975,895	-		Pf6N2E2_1668	0.72	-1.5
1,976,247	+				+2.7
1,976,282	-				+0.5
1,976,441	+				+0.7
1,976,441	+				+0.3
1,976,441	+				-0.3
1,976,442	-				+0.0
1,976,501	+				+1.6
1,976,535	+				-2.5
1,976,536	-				+1.6
1,976,536	-				-2.3
1,976,536	-				+1.7
1,976,613	+		Pf6N2E2_1669	0.42	+0.9
1,976,744	-				-3.1
1,976,750	+				+1.3
1,976,922	-		Pf6N2E2_1670	0.24	-0.5
1,976,922	-		Pf6N2E2_1670	0.24	-2.3
1,977,182	+		Pf6N2E2_1670	0.75	-1.3
1,977,183	-		Pf6N2E2_1670	0.75	+1.3
1,977,211	-		Pf6N2E2_1670	0.80	-2.7
1,977,258	-		Pf6N2E2_1670	0.90	+0.7
1,977,284	+				+1.0
1,977,284	+				+1.4