Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1615

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,887,879	-		Pf6N2E2_1614	0.17	+0.4
1,887,879	-		Pf6N2E2_1614	0.17	+0.6
1,887,965	+		Pf6N2E2_1614	0.26	+0.7
1,887,965	+		Pf6N2E2_1614	0.26	-1.1
1,887,966	-		Pf6N2E2_1614	0.27	+0.4
1,887,969	+		Pf6N2E2_1614	0.27	+0.3
1,887,970	-		Pf6N2E2_1614	0.27	-1.6
1,887,970	-		Pf6N2E2_1614	0.27	+1.0
1,887,970	-		Pf6N2E2_1614	0.27	+0.5
1,888,208	-		Pf6N2E2_1614	0.53	+0.6
1,888,336	+		Pf6N2E2_1614	0.67	-2.2
1,888,452	+		Pf6N2E2_1614	0.80	+0.4
1,888,453	-		Pf6N2E2_1614	0.80	+1.9
1,888,456	-		Pf6N2E2_1614	0.81	+1.1
1,888,512	-		Pf6N2E2_1614	0.87	+1.3
1,888,638	-				-0.3
1,888,667	-				+0.9
1,888,670	+				+3.3
1,888,723	-				+1.8
1,888,755	+				-1.4
1,888,756	-				-2.1
1,888,756	-				+1.0
1,888,756	-				-2.1
1,888,756	-				-0.6
1,888,840	+				+2.3
1,888,841	-				+1.4
1,888,930	+		Pf6N2E2_1615	0.17	-1.2
1,888,930	+		Pf6N2E2_1615	0.17	+0.7
1,888,930	+		Pf6N2E2_1615	0.17	-0.8
1,888,930	+		Pf6N2E2_1615	0.17	-1.8
1,888,930	+		Pf6N2E2_1615	0.17	-0.9
1,888,931	-		Pf6N2E2_1615	0.17	-1.4
1,888,941	+		Pf6N2E2_1615	0.18	-2.6
1,889,065	+		Pf6N2E2_1615	0.30	-1.2
1,889,066	-		Pf6N2E2_1615	0.31	+1.4
1,889,113	+		Pf6N2E2_1615	0.35	-0.5
1,889,125	+		Pf6N2E2_1615	0.36	-1.8
1,889,126	-		Pf6N2E2_1615	0.37	-2.3
1,889,128	+		Pf6N2E2_1615	0.37	+1.6
1,889,128	+		Pf6N2E2_1615	0.37	-0.6
1,889,128	+		Pf6N2E2_1615	0.37	-2.6
1,889,338	-		Pf6N2E2_1615	0.58	+0.3
1,889,830	+				+0.6
1,889,830	+				+2.0
1,889,831	-				-2.4
1,889,831	-				-0.6
1,889,833	+				+1.9
1,889,833	+				+0.6
1,889,833	+				-0.2
1,889,834	-				+1.9
1,889,834	-				+2.3
1,889,834	-				-3.4
1,889,866	+				+0.8
1,889,867	-				+1.1
1,889,871	+				-0.9
1,890,078	-		Pf6N2E2_1616	0.26	-0.5
1,890,142	-		Pf6N2E2_1616	0.35	+3.2
1,890,213	+		Pf6N2E2_1616	0.44	-1.1
1,890,214	-		Pf6N2E2_1616	0.44	-1.6
1,890,214	-		Pf6N2E2_1616	0.44	+0.4
1,890,214	-		Pf6N2E2_1616	0.44	-0.1
1,890,219	+		Pf6N2E2_1616	0.45	+1.4
1,890,219	+		Pf6N2E2_1616	0.45	+0.4
1,890,220	-		Pf6N2E2_1616	0.45	+1.8
1,890,312	+		Pf6N2E2_1616	0.57	+1.1
1,890,312	+		Pf6N2E2_1616	0.57	-2.3
1,890,366	+		Pf6N2E2_1616	0.64	-1.9
1,890,379	-		Pf6N2E2_1616	0.66	+0.1
1,890,438	+		Pf6N2E2_1616	0.74	-0.4
1,890,438	+		Pf6N2E2_1616	0.74	+0.5
1,890,439	-		Pf6N2E2_1616	0.74	-1.6
1,890,505	+		Pf6N2E2_1616	0.82	+1.2
1,890,505	+		Pf6N2E2_1616	0.82	+1.3
1,890,546	-		Pf6N2E2_1616	0.88	+2.3
1,890,546	-		Pf6N2E2_1616	0.88	+0.1
1,890,610	-				-2.8
1,890,610	-				-2.2
1,890,610	-				+1.6
1,890,634	+				-1.6
1,890,635	-				+0.6
1,890,714	-				+0.3