Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_138

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
187,085	-		Pf6N2E2_137	0.64	-0.6
187,168	+		Pf6N2E2_137	0.70	-1.2
187,168	+		Pf6N2E2_137	0.70	+2.0
187,168	+		Pf6N2E2_137	0.70	+1.8
187,171	+		Pf6N2E2_137	0.70	-1.4
187,171	+		Pf6N2E2_137	0.70	+1.0
187,172	-		Pf6N2E2_137	0.70	-2.2
187,293	+		Pf6N2E2_137	0.78	-2.6
187,293	+		Pf6N2E2_137	0.78	-1.1
187,294	-		Pf6N2E2_137	0.78	+0.1
187,359	+		Pf6N2E2_137	0.82	-0.8
187,360	-		Pf6N2E2_137	0.82	+0.6
187,468	+		Pf6N2E2_137	0.89	-2.2
187,585	+				+0.6
187,585	+				-1.4
187,634	+				+1.8
187,634	+				-0.4
187,634	+				-3.1
187,634	+				+0.5
187,634	+				-2.4
187,634	+				+0.2
187,634	+				-1.8
187,634	+				+1.1
187,634	+				-2.5
187,634	+				+0.5
187,634	+				-1.7
187,635	-				+0.2
187,635	-				-1.6
187,635	-				+1.6
187,635	-				+1.6
187,635	-				+0.1
187,635	-				+1.8
187,635	-				+1.3
187,840	-		Pf6N2E2_138	0.19	+2.6
187,840	-		Pf6N2E2_138	0.19	-2.5
187,840	-		Pf6N2E2_138	0.19	+0.2
188,005	+		Pf6N2E2_138	0.37	-1.7
188,006	-		Pf6N2E2_138	0.37	-1.1
188,171	-		Pf6N2E2_138	0.54	-1.6
188,263	+		Pf6N2E2_138	0.64	+1.6
188,326	+		Pf6N2E2_138	0.71	-1.6
188,381	-		Pf6N2E2_138	0.77	-1.2
188,515	+				+0.5
188,540	-				-1.2
188,540	-				-0.8
188,655	+				-1.8
188,656	-				+1.1
188,656	-				-1.9
188,656	-				+1.4
188,656	-				-2.2
188,662	+				-3.1
188,662	+				-0.6
188,699	-				-1.4
188,699	-				+0.2
188,715	+				-0.9
188,715	+				-0.2
188,715	+				+1.1
188,715	+				-1.6
188,716	-				-1.7
188,716	-				-1.6
188,716	-				-2.3
188,723	-				+1.8
188,723	-				-1.2
188,723	-				+1.6
188,747	+				+0.8
188,747	+				+1.2
188,747	+				+1.3
188,748	-				+0.6
188,748	-				+0.7
188,748	-				-1.7
188,748	-				-1.2
188,748	-				+1.3
188,748	-				+0.2
188,748	-				+0.3
188,748	-				-1.1
188,789	+				-1.8
188,789	+				+1.0
188,789	+				+0.8
188,790	-				-1.1
188,833	+				+0.2
188,833	+				-0.6
188,937	+				+0.8
188,937	+				-1.0
188,937	+				+0.2
188,937	+				-0.9
188,937	+				-1.8
188,938	-				+1.5
188,938	-				-0.2
188,938	-				+2.2
188,938	-				-1.2
188,938	-				-2.2
188,938	-				+0.8
188,939	+				-3.1
188,939	+				+2.2
188,939	+				+1.2
188,939	+				-2.2
188,939	+				+2.1
188,939	+				-1.1
188,939	+				-1.8
188,939	+				-0.8
188,939	+				+0.3
188,940	-				-1.2
188,940	-				+2.6
188,940	-				-1.6
188,940	-				-2.6
188,940	-				+0.0
188,940	-				+1.6
188,940	-				-0.8
188,941	+				-0.3
188,942	-				+0.2
189,066	+				-0.2
189,118	+				-0.4
189,119	-				+0.6
189,336	+		Pf6N2E2_139	0.32	+1.8
189,336	+		Pf6N2E2_139	0.32	-1.7
189,336	+		Pf6N2E2_139	0.32	+1.7
189,336	+		Pf6N2E2_139	0.32	-1.5
189,336	+		Pf6N2E2_139	0.32	-1.2
189,336	+		Pf6N2E2_139	0.32	+0.5
189,336	+		Pf6N2E2_139	0.32	+1.1
189,336	+		Pf6N2E2_139	0.32	-2.5
189,337	-		Pf6N2E2_139	0.32	+1.5
189,337	-		Pf6N2E2_139	0.32	+2.3
189,337	-		Pf6N2E2_139	0.32	-0.8
189,337	-		Pf6N2E2_139	0.32	+1.9
189,337	-		Pf6N2E2_139	0.32	+0.8
189,337	-		Pf6N2E2_139	0.32	-1.2
189,337	-		Pf6N2E2_139	0.32	-1.4
189,337	-		Pf6N2E2_139	0.32	+0.4
189,337	-		Pf6N2E2_139	0.32	-0.2
189,337	-		Pf6N2E2_139	0.32	-2.6
189,337	-		Pf6N2E2_139	0.32	+1.2
189,337	-		Pf6N2E2_139	0.32	-0.6
189,402	+		Pf6N2E2_139	0.39	-1.8
189,402	+		Pf6N2E2_139	0.39	+0.8
189,402	+		Pf6N2E2_139	0.39	+0.1
189,403	-		Pf6N2E2_139	0.39	-1.7
189,403	-		Pf6N2E2_139	0.39	+0.7
189,403	-		Pf6N2E2_139	0.39	+0.5