Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1308

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,541,206	-				-0.2
1,541,206	-				-0.1
1,541,390	+				-2.1
1,541,407	-				+1.6
1,541,751	-		Pf6N2E2_1307	0.41	+0.2
1,541,801	+		Pf6N2E2_1307	0.49	-1.2
1,541,801	+		Pf6N2E2_1307	0.49	-1.8
1,541,801	+		Pf6N2E2_1307	0.49	-1.4
1,541,802	-		Pf6N2E2_1307	0.49	-2.3
1,541,802	-		Pf6N2E2_1307	0.49	-0.7
1,541,802	-		Pf6N2E2_1307	0.49	+0.0
1,541,802	-		Pf6N2E2_1307	0.49	+1.3
1,541,802	-		Pf6N2E2_1307	0.49	-0.9
1,541,802	-		Pf6N2E2_1307	0.49	-2.8
1,541,912	+		Pf6N2E2_1307	0.65	-2.2
1,541,976	+		Pf6N2E2_1307	0.74	-1.9
1,541,976	+		Pf6N2E2_1307	0.74	-1.6
1,541,976	+		Pf6N2E2_1307	0.74	+0.4
1,541,976	+		Pf6N2E2_1307	0.74	+1.7
1,541,976	+		Pf6N2E2_1307	0.74	-0.8
1,542,058	-		Pf6N2E2_1307	0.87	+2.1
1,542,112	+				+0.2
1,542,377	-		Pf6N2E2_1308	0.30	+2.1
1,542,421	+		Pf6N2E2_1308	0.36	-1.4
1,542,422	-		Pf6N2E2_1308	0.36	+1.6
1,542,422	-		Pf6N2E2_1308	0.36	-2.8
1,542,431	-		Pf6N2E2_1308	0.37	-1.4
1,542,545	-		Pf6N2E2_1308	0.52	-0.1
1,542,559	+		Pf6N2E2_1308	0.54	-1.8
1,542,560	-		Pf6N2E2_1308	0.54	-1.9
1,542,739	+		Pf6N2E2_1308	0.77	+1.9
1,542,739	+		Pf6N2E2_1308	0.77	-1.4
1,542,979	-				-1.4
1,543,308	+		Pf6N2E2_1309	0.26	+0.8
1,543,318	-		Pf6N2E2_1309	0.27	+1.6
1,543,360	+		Pf6N2E2_1309	0.30	-2.4
1,543,361	-		Pf6N2E2_1309	0.30	+0.5
1,543,501	+		Pf6N2E2_1309	0.40	-2.4
1,543,565	-		Pf6N2E2_1309	0.44	+0.3
1,543,908	+		Pf6N2E2_1309	0.68	-2.4