Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1120

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,313,142	-		Pf6N2E2_1119	0.41	+0.9
1,313,319	+		Pf6N2E2_1119	0.60	-0.6
1,313,320	-		Pf6N2E2_1119	0.60	-0.9
1,313,469	+		Pf6N2E2_1119	0.77	-1.8
1,313,469	+		Pf6N2E2_1119	0.77	+1.4
1,313,470	-		Pf6N2E2_1119	0.77	-0.1
1,313,470	-		Pf6N2E2_1119	0.77	-0.3
1,313,470	-		Pf6N2E2_1119	0.77	-1.6
1,313,473	+		Pf6N2E2_1119	0.77	+0.5
1,313,474	-		Pf6N2E2_1119	0.77	-0.2
1,313,967	+				-0.6
1,314,134	+				-2.8
1,314,134	+				-2.7
1,314,134	+				+1.6
1,314,134	+				+1.7
1,314,134	+				+0.7
1,314,134	+				-0.6
1,314,135	-				-2.4
1,314,677	+		Pf6N2E2_1120	0.22	+2.3
1,314,757	+		Pf6N2E2_1120	0.25	+1.0
1,314,758	-		Pf6N2E2_1120	0.25	+1.3
1,314,950	+		Pf6N2E2_1120	0.32	-2.9
1,314,950	+		Pf6N2E2_1120	0.32	-0.6
1,314,951	-		Pf6N2E2_1120	0.33	-0.2
1,314,954	-		Pf6N2E2_1120	0.33	+0.5
1,314,969	-		Pf6N2E2_1120	0.33	+0.9
1,314,969	-		Pf6N2E2_1120	0.33	+2.2
1,314,978	-		Pf6N2E2_1120	0.34	-2.3
1,315,106	+		Pf6N2E2_1120	0.39	-0.2
1,315,106	+		Pf6N2E2_1120	0.39	+2.5
1,315,106	+		Pf6N2E2_1120	0.39	-2.0
1,315,107	-		Pf6N2E2_1120	0.39	+3.1
1,315,165	+		Pf6N2E2_1120	0.41	+0.2
1,315,389	+		Pf6N2E2_1120	0.50	+1.2
1,315,389	+		Pf6N2E2_1120	0.50	-0.6
1,315,390	-		Pf6N2E2_1120	0.50	+0.1
1,315,390	-		Pf6N2E2_1120	0.50	-0.6
1,315,390	-		Pf6N2E2_1120	0.50	+2.3
1,315,470	-		Pf6N2E2_1120	0.53	+0.7
1,315,817	+		Pf6N2E2_1120	0.67	-2.3
1,315,818	-		Pf6N2E2_1120	0.67	-1.9
1,315,818	-		Pf6N2E2_1120	0.67	+0.4
1,315,818	-		Pf6N2E2_1120	0.67	-0.6
1,316,141	+		Pf6N2E2_1120	0.80	+0.2
1,316,141	+		Pf6N2E2_1120	0.80	+0.2
1,316,141	+		Pf6N2E2_1120	0.80	+1.4
1,316,142	-		Pf6N2E2_1120	0.80	-2.8
1,316,142	-		Pf6N2E2_1120	0.80	-1.8
1,316,168	+		Pf6N2E2_1120	0.81	-0.2
1,316,168	+		Pf6N2E2_1120	0.81	+1.0
1,316,314	+		Pf6N2E2_1120	0.87	+1.7
1,316,314	+		Pf6N2E2_1120	0.87	+0.0
1,316,315	-		Pf6N2E2_1120	0.87	+1.0
1,316,405	+				-2.4
1,316,406	-				-0.9
1,316,562	-				-1.6
1,316,588	+				+2.1
1,316,588	+				+0.4
1,316,601	-				-0.2
1,316,601	-				-0.3
1,316,601	-				-1.4
1,316,761	-				-1.8
1,316,761	-				-2.4
1,316,906	+				+1.5
1,316,907	-				-0.7
1,316,907	-				-1.1
1,316,937	-				+1.0
1,317,398	+		Pf6N2E2_1121	0.31	-2.2
1,317,433	+		Pf6N2E2_1121	0.33	-3.6
1,317,580	+		Pf6N2E2_1121	0.41	+0.9
1,317,581	-		Pf6N2E2_1121	0.41	+3.0