Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1106

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,292,283	-		Pf6N2E2_1105	0.40	+1.2
1,292,297	+		Pf6N2E2_1105	0.41	-0.7
1,292,322	-		Pf6N2E2_1105	0.43	-1.6
1,292,336	+		Pf6N2E2_1105	0.44	-2.1
1,292,336	+		Pf6N2E2_1105	0.44	+2.0
1,292,336	+		Pf6N2E2_1105	0.44	-2.0
1,292,336	+		Pf6N2E2_1105	0.44	+0.8
1,292,337	-		Pf6N2E2_1105	0.44	+0.3
1,292,480	+		Pf6N2E2_1105	0.55	+0.8
1,292,486	+		Pf6N2E2_1105	0.55	-0.1
1,292,631	-		Pf6N2E2_1105	0.67	-1.4
1,292,675	+		Pf6N2E2_1105	0.70	+0.5
1,292,675	+		Pf6N2E2_1105	0.70	+0.3
1,292,675	+		Pf6N2E2_1105	0.70	+3.0
1,292,675	+		Pf6N2E2_1105	0.70	-1.4
1,292,675	+		Pf6N2E2_1105	0.70	+1.8
1,292,675	+		Pf6N2E2_1105	0.70	+0.6
1,292,676	-		Pf6N2E2_1105	0.70	+1.4
1,292,676	-		Pf6N2E2_1105	0.70	+0.6
1,292,676	-		Pf6N2E2_1105	0.70	-0.8
1,292,684	+		Pf6N2E2_1105	0.71	-1.4
1,292,684	+		Pf6N2E2_1105	0.71	-0.0
1,292,685	-		Pf6N2E2_1105	0.71	+0.7
1,292,993	+				+0.4
1,292,993	+				+0.7
1,292,993	+				+2.2
1,292,993	+				-1.0
1,292,993	+				+0.4
1,292,993	+				+1.4
1,292,994	-				+0.9
1,292,994	-				-1.4
1,292,994	-				+0.5
1,293,001	+				-2.5
1,293,040	+				-0.1
1,293,078	-				-0.6
1,293,084	+				-0.5
1,293,084	+				-0.9
1,293,084	+				-0.7
1,293,085	-				+2.2
1,293,085	-				+1.1
1,293,094	+				+1.4
1,293,108	+				+1.0
1,293,203	+				+1.0
1,293,203	+				+1.7
1,293,203	+				+0.3
1,293,204	-				-0.9
1,293,437	+		Pf6N2E2_1106	0.25	-0.6
1,293,437	+		Pf6N2E2_1106	0.25	-0.7
1,293,496	+		Pf6N2E2_1106	0.31	-1.4
1,293,698	-		Pf6N2E2_1106	0.53	-2.0
1,293,913	+		Pf6N2E2_1106	0.76	-1.8
1,293,914	-		Pf6N2E2_1106	0.76	+0.2
1,293,914	-		Pf6N2E2_1106	0.76	-1.6
1,294,028	+		Pf6N2E2_1106	0.88	-1.3
1,294,028	+		Pf6N2E2_1106	0.88	+1.3
1,294,029	-		Pf6N2E2_1106	0.89	-0.4
1,294,029	-		Pf6N2E2_1106	0.89	-2.0
1,294,199	-				+0.4
1,294,199	-				-0.5
1,294,372	+				+1.6
1,294,372	+				+2.1
1,294,372	+				+1.7
1,294,373	-				+1.4
1,294,373	-				+0.4
1,294,373	-				+1.4
1,294,373	-				-0.8
1,294,373	-				+1.4
1,294,373	-				+0.3
1,294,434	-				-1.4
1,294,584	+				+0.2
1,294,585	-				+1.1
1,294,585	-				-2.8
1,294,824	+		Pf6N2E2_1107	0.11	+1.0
1,294,824	+		Pf6N2E2_1107	0.11	+3.0
1,294,825	-		Pf6N2E2_1107	0.11	+0.0
1,294,825	-		Pf6N2E2_1107	0.11	-0.3
1,294,825	-		Pf6N2E2_1107	0.11	-1.7
1,294,833	+		Pf6N2E2_1107	0.11	+1.3
1,294,833	+		Pf6N2E2_1107	0.11	+1.0
1,294,834	-		Pf6N2E2_1107	0.11	-1.6
1,294,834	-		Pf6N2E2_1107	0.11	+3.0
1,294,917	+		Pf6N2E2_1107	0.13	+0.2
1,294,918	-		Pf6N2E2_1107	0.13	+0.2
1,295,047	+		Pf6N2E2_1107	0.15	-0.4