Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27795 and BWI76_RS27800 overlap by 4 nucleotides BWI76_RS27800 and BWI76_RS27805 are separated by 301 nucleotides
BWI76_RS27795: BWI76_RS27795 - two-component system sensor histidine kinase UhpB, at 5,767,027 to 5,768,529
_RS27795
BWI76_RS27800: BWI76_RS27800 - DNA-binding response regulator, at 5,768,526 to 5,769,119
_RS27800
BWI76_RS27805: BWI76_RS27805 - membrane protein, at 5,769,421 to 5,770,293
_RS27805
Position (kb) 5768
5769
5770 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 5767.596 kb on + strand, within BWI76_RS27795 at 5767.634 kb on - strand, within BWI76_RS27795 at 5767.697 kb on - strand, within BWI76_RS27795 at 5767.814 kb on + strand, within BWI76_RS27795 at 5767.856 kb on + strand, within BWI76_RS27795 at 5767.861 kb on + strand, within BWI76_RS27795 at 5767.943 kb on - strand, within BWI76_RS27795 at 5767.949 kb on - strand, within BWI76_RS27795 at 5768.058 kb on - strand, within BWI76_RS27795 at 5768.104 kb on - strand, within BWI76_RS27795 at 5768.381 kb on - strand at 5768.412 kb on + strand at 5768.558 kb on + strand at 5768.630 kb on + strand, within BWI76_RS27800 at 5768.807 kb on + strand, within BWI76_RS27800 at 5768.874 kb on + strand, within BWI76_RS27800 at 5768.913 kb on - strand, within BWI76_RS27800 at 5768.913 kb on - strand, within BWI76_RS27800 at 5768.938 kb on + strand, within BWI76_RS27800 at 5768.970 kb on + strand, within BWI76_RS27800 at 5768.978 kb on - strand, within BWI76_RS27800 at 5769.068 kb on - strand at 5769.079 kb on - strand at 5769.105 kb on - strand at 5769.108 kb on - strand at 5769.115 kb on + strand at 5769.123 kb on - strand at 5769.159 kb on + strand at 5769.159 kb on - strand at 5769.165 kb on - strand at 5769.167 kb on - strand at 5769.167 kb on - strand at 5769.167 kb on - strand at 5769.167 kb on - strand at 5769.167 kb on - strand at 5769.168 kb on - strand at 5769.168 kb on - strand at 5769.179 kb on + strand at 5769.181 kb on - strand at 5769.189 kb on + strand at 5769.192 kb on - strand at 5769.192 kb on - strand at 5769.194 kb on + strand at 5769.194 kb on + strand at 5769.194 kb on + strand at 5769.194 kb on + strand at 5769.197 kb on - strand at 5769.202 kb on + strand at 5769.202 kb on - strand at 5769.202 kb on - strand at 5769.204 kb on - strand at 5769.204 kb on - strand at 5769.209 kb on + strand at 5769.222 kb on - strand at 5769.236 kb on + strand at 5769.239 kb on + strand at 5769.244 kb on - strand at 5769.255 kb on - strand at 5769.273 kb on + strand at 5769.273 kb on + strand at 5769.281 kb on - strand at 5769.301 kb on - strand at 5769.301 kb on - strand at 5769.301 kb on - strand at 5769.364 kb on + strand at 5769.366 kb on + strand at 5769.378 kb on + strand at 5769.411 kb on + strand at 5769.436 kb on + strand at 5769.445 kb on + strand at 5769.495 kb on + strand at 5769.503 kb on - strand at 5769.510 kb on - strand, within BWI76_RS27805 at 5769.519 kb on - strand, within BWI76_RS27805 at 5769.552 kb on + strand, within BWI76_RS27805 at 5769.586 kb on + strand, within BWI76_RS27805 at 5769.594 kb on + strand, within BWI76_RS27805 at 5769.595 kb on + strand, within BWI76_RS27805 at 5769.602 kb on + strand, within BWI76_RS27805 at 5769.603 kb on - strand, within BWI76_RS27805 at 5769.612 kb on + strand at 5769.805 kb on + strand, within BWI76_RS27805 at 5769.810 kb on + strand, within BWI76_RS27805 at 5769.813 kb on - strand, within BWI76_RS27805 at 5769.858 kb on + strand, within BWI76_RS27805 at 5769.899 kb on - strand, within BWI76_RS27805 at 5769.901 kb on - strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.949 kb on + strand, within BWI76_RS27805 at 5769.951 kb on + strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.957 kb on - strand, within BWI76_RS27805 at 5769.959 kb on - strand, within BWI76_RS27805 at 5769.973 kb on - strand, within BWI76_RS27805 at 5769.974 kb on - strand, within BWI76_RS27805 at 5769.974 kb on - strand, within BWI76_RS27805 at 5769.980 kb on + strand, within BWI76_RS27805 at 5769.980 kb on + strand, within BWI76_RS27805 at 5769.980 kb on + strand, within BWI76_RS27805 at 5769.986 kb on - strand, within BWI76_RS27805 at 5769.988 kb on - strand, within BWI76_RS27805 at 5769.991 kb on + strand, within BWI76_RS27805 at 5769.999 kb on + strand, within BWI76_RS27805 at 5769.999 kb on + strand, within BWI76_RS27805 at 5770.007 kb on - strand, within BWI76_RS27805 at 5770.013 kb on + strand, within BWI76_RS27805 at 5770.013 kb on + strand, within BWI76_RS27805 at 5770.021 kb on - strand, within BWI76_RS27805 at 5770.030 kb on + strand, within BWI76_RS27805 at 5770.044 kb on + strand, within BWI76_RS27805 at 5770.044 kb on + strand, within BWI76_RS27805 at 5770.047 kb on + strand, within BWI76_RS27805 at 5770.047 kb on + strand, within BWI76_RS27805 at 5770.049 kb on + strand, within BWI76_RS27805 at 5770.049 kb on + strand, within BWI76_RS27805 at 5770.049 kb on + strand, within BWI76_RS27805 at 5770.052 kb on - strand, within BWI76_RS27805 at 5770.053 kb on + strand, within BWI76_RS27805 at 5770.055 kb on - strand, within BWI76_RS27805 at 5770.057 kb on - strand, within BWI76_RS27805 at 5770.057 kb on - strand, within BWI76_RS27805 at 5770.057 kb on - strand, within BWI76_RS27805 at 5770.057 kb on - strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.067 kb on + strand, within BWI76_RS27805 at 5770.074 kb on + strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.075 kb on - strand, within BWI76_RS27805 at 5770.077 kb on + strand, within BWI76_RS27805 at 5770.077 kb on + strand, within BWI76_RS27805 at 5770.092 kb on + strand, within BWI76_RS27805 at 5770.092 kb on + strand, within BWI76_RS27805 at 5770.094 kb on + strand, within BWI76_RS27805 at 5770.095 kb on - strand, within BWI76_RS27805 at 5770.097 kb on - strand, within BWI76_RS27805 at 5770.100 kb on - strand, within BWI76_RS27805 at 5770.101 kb on - strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.107 kb on + strand, within BWI76_RS27805 at 5770.115 kb on - strand, within BWI76_RS27805 at 5770.115 kb on - strand, within BWI76_RS27805 at 5770.115 kb on - strand, within BWI76_RS27805 at 5770.115 kb on - strand, within BWI76_RS27805 at 5770.115 kb on - strand, within BWI76_RS27805
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 5,767,596 + BWI76_RS27795 0.38 -0.6 5,767,634 - BWI76_RS27795 0.40 -2.2 5,767,697 - BWI76_RS27795 0.45 -0.5 5,767,814 + BWI76_RS27795 0.52 -0.4 5,767,856 + BWI76_RS27795 0.55 +0.8 5,767,861 + BWI76_RS27795 0.55 -1.3 5,767,943 - BWI76_RS27795 0.61 -0.2 5,767,949 - BWI76_RS27795 0.61 -1.6 5,768,058 - BWI76_RS27795 0.69 +0.8 5,768,104 - BWI76_RS27795 0.72 -0.0 5,768,381 - -3.7 5,768,412 + -1.7 5,768,558 + +0.9 5,768,630 + BWI76_RS27800 0.18 -0.1 5,768,807 + BWI76_RS27800 0.47 -1.1 5,768,874 + BWI76_RS27800 0.59 -3.6 5,768,913 - BWI76_RS27800 0.65 +0.3 5,768,913 - BWI76_RS27800 0.65 +0.2 5,768,938 + BWI76_RS27800 0.69 +1.4 5,768,970 + BWI76_RS27800 0.75 -0.8 5,768,978 - BWI76_RS27800 0.76 -2.9 5,769,068 - +1.4 5,769,079 - -1.5 5,769,105 - +0.2 5,769,108 - -0.8 5,769,115 + +0.2 5,769,123 - -1.8 5,769,159 + +2.2 5,769,159 - +0.2 5,769,165 - -0.9 5,769,167 - -3.5 5,769,167 - -0.3 5,769,167 - -0.3 5,769,167 - -4.1 5,769,167 - -1.6 5,769,168 - -0.8 5,769,168 - -0.1 5,769,179 + +0.5 5,769,181 - -0.3 5,769,189 + +0.8 5,769,192 - +0.4 5,769,192 - -0.9 5,769,194 + +1.7 5,769,194 + +1.6 5,769,194 + -0.9 5,769,194 + +1.2 5,769,197 - -0.8 5,769,202 + -1.1 5,769,202 - -0.3 5,769,202 - -1.9 5,769,204 - +0.2 5,769,204 - +0.2 5,769,209 + -0.9 5,769,222 - -1.3 5,769,236 + -2.3 5,769,239 + -1.2 5,769,244 - +0.2 5,769,255 - -0.1 5,769,273 + -0.4 5,769,273 + +1.1 5,769,281 - -2.7 5,769,301 - +1.7 5,769,301 - -0.9 5,769,301 - +1.8 5,769,364 + +1.9 5,769,366 + -1.3 5,769,378 + -2.3 5,769,411 + -0.6 5,769,436 + -3.7 5,769,445 + -1.0 5,769,495 + +0.7 5,769,503 - -2.1 5,769,510 - BWI76_RS27805 0.10 -0.8 5,769,519 - BWI76_RS27805 0.11 +0.3 5,769,552 + BWI76_RS27805 0.15 +0.7 5,769,586 + BWI76_RS27805 0.19 +1.5 5,769,594 + BWI76_RS27805 0.20 +0.7 5,769,595 + BWI76_RS27805 0.20 -0.8 5,769,602 + BWI76_RS27805 0.21 -0.6 5,769,603 - BWI76_RS27805 0.21 +1.2 5,769,612 + -0.1 5,769,805 + BWI76_RS27805 0.44 +0.8 5,769,810 + BWI76_RS27805 0.45 -1.8 5,769,813 - BWI76_RS27805 0.45 -2.9 5,769,858 + BWI76_RS27805 0.50 +2.5 5,769,899 - BWI76_RS27805 0.55 -2.8 5,769,901 - BWI76_RS27805 0.55 -0.3 5,769,949 + BWI76_RS27805 0.60 -1.6 5,769,949 + BWI76_RS27805 0.60 -2.6 5,769,949 + BWI76_RS27805 0.60 +2.6 5,769,949 + BWI76_RS27805 0.60 +0.7 5,769,949 + BWI76_RS27805 0.60 +0.7 5,769,949 + BWI76_RS27805 0.60 -2.5 5,769,949 + BWI76_RS27805 0.60 +0.2 5,769,949 + BWI76_RS27805 0.60 +2.7 5,769,949 + BWI76_RS27805 0.60 -1.3 5,769,949 + BWI76_RS27805 0.60 +1.0 5,769,951 + BWI76_RS27805 0.61 -0.6 5,769,957 - BWI76_RS27805 0.61 -0.8 5,769,957 - BWI76_RS27805 0.61 -2.3 5,769,957 - BWI76_RS27805 0.61 -1.1 5,769,957 - BWI76_RS27805 0.61 -0.3 5,769,957 - BWI76_RS27805 0.61 -4.0 5,769,957 - BWI76_RS27805 0.61 -0.5 5,769,957 - BWI76_RS27805 0.61 +1.7 5,769,959 - BWI76_RS27805 0.62 +0.2 5,769,973 - BWI76_RS27805 0.63 -0.6 5,769,974 - BWI76_RS27805 0.63 -2.1 5,769,974 - BWI76_RS27805 0.63 -2.2 5,769,980 + BWI76_RS27805 0.64 -2.1 5,769,980 + BWI76_RS27805 0.64 +1.8 5,769,980 + BWI76_RS27805 0.64 -1.1 5,769,986 - BWI76_RS27805 0.65 -0.6 5,769,988 - BWI76_RS27805 0.65 +2.0 5,769,991 + BWI76_RS27805 0.65 +3.2 5,769,999 + BWI76_RS27805 0.66 -0.3 5,769,999 + BWI76_RS27805 0.66 +1.4 5,770,007 - BWI76_RS27805 0.67 -0.0 5,770,013 + BWI76_RS27805 0.68 -0.8 5,770,013 + BWI76_RS27805 0.68 -2.3 5,770,021 - BWI76_RS27805 0.69 +5.3 5,770,030 + BWI76_RS27805 0.70 +1.1 5,770,044 + BWI76_RS27805 0.71 +0.4 5,770,044 + BWI76_RS27805 0.71 -1.5 5,770,047 + BWI76_RS27805 0.72 +0.7 5,770,047 + BWI76_RS27805 0.72 +3.4 5,770,049 + BWI76_RS27805 0.72 +2.6 5,770,049 + BWI76_RS27805 0.72 -2.8 5,770,049 + BWI76_RS27805 0.72 +1.0 5,770,052 - BWI76_RS27805 0.72 -2.4 5,770,053 + BWI76_RS27805 0.72 -2.3 5,770,055 - BWI76_RS27805 0.73 +1.1 5,770,057 - BWI76_RS27805 0.73 -2.8 5,770,057 - BWI76_RS27805 0.73 -0.4 5,770,057 - BWI76_RS27805 0.73 -0.8 5,770,057 - BWI76_RS27805 0.73 -1.5 5,770,067 + BWI76_RS27805 0.74 +2.2 5,770,067 + BWI76_RS27805 0.74 +0.8 5,770,067 + BWI76_RS27805 0.74 -1.5 5,770,067 + BWI76_RS27805 0.74 -2.6 5,770,067 + BWI76_RS27805 0.74 -1.3 5,770,067 + BWI76_RS27805 0.74 -1.3 5,770,067 + BWI76_RS27805 0.74 -0.3 5,770,067 + BWI76_RS27805 0.74 -2.9 5,770,067 + +0.2 5,770,067 + BWI76_RS27805 0.74 +0.2 5,770,067 + BWI76_RS27805 0.74 +0.0 5,770,067 + BWI76_RS27805 0.74 -0.1 5,770,067 + BWI76_RS27805 0.74 +1.9 5,770,067 + BWI76_RS27805 0.74 -0.1 5,770,074 + BWI76_RS27805 0.75 -2.8 5,770,075 - BWI76_RS27805 0.75 -2.8 5,770,075 - BWI76_RS27805 0.75 -1.2 5,770,075 - BWI76_RS27805 0.75 +0.2 5,770,075 - BWI76_RS27805 0.75 +0.2 5,770,075 - BWI76_RS27805 0.75 -3.0 5,770,075 - BWI76_RS27805 0.75 -0.1 5,770,075 - BWI76_RS27805 0.75 -0.6 5,770,075 - BWI76_RS27805 0.75 -0.9 5,770,077 + BWI76_RS27805 0.75 -1.8 5,770,077 + BWI76_RS27805 0.75 -2.9 5,770,092 + BWI76_RS27805 0.77 -0.5 5,770,092 + BWI76_RS27805 0.77 -1.1 5,770,094 + BWI76_RS27805 0.77 -0.3 5,770,095 - BWI76_RS27805 0.77 +0.2 5,770,097 - BWI76_RS27805 0.77 -1.7 5,770,100 - BWI76_RS27805 0.78 +1.2 5,770,101 - BWI76_RS27805 0.78 -0.8 5,770,107 + BWI76_RS27805 0.79 +2.0 5,770,107 + BWI76_RS27805 0.79 -1.9 5,770,107 + BWI76_RS27805 0.79 +0.2 5,770,107 + BWI76_RS27805 0.79 -0.9 5,770,107 + BWI76_RS27805 0.79 +0.7 5,770,107 + BWI76_RS27805 0.79 +0.4 5,770,107 + BWI76_RS27805 0.79 -2.1 5,770,107 + BWI76_RS27805 0.79 -3.0 5,770,107 + BWI76_RS27805 0.79 -0.1 5,770,115 - BWI76_RS27805 0.79 +0.0 5,770,115 - BWI76_RS27805 0.79 -0.1 5,770,115 - BWI76_RS27805 0.79 +0.7 5,770,115 - BWI76_RS27805 0.79 +1.2 5,770,115 - BWI76_RS27805 0.79 +0.9
Or see this region's nucleotide sequence