Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22875 and BWI76_RS22880 are separated by 53 nucleotides BWI76_RS22880 and BWI76_RS22885 are separated by 149 nucleotides
BWI76_RS22875: BWI76_RS22875 - serine transporter, at 4,772,778 to 4,774,067
_RS22875
BWI76_RS22880: BWI76_RS22880 - L-serine ammonia-lyase, at 4,774,121 to 4,775,488
_RS22880
BWI76_RS22885: BWI76_RS22885 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,775,638 to 4,776,579
_RS22885
Position (kb)
4774
4775
4776 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4773.154 kb on + strand, within BWI76_RS22875 at 4773.274 kb on + strand, within BWI76_RS22875 at 4773.371 kb on - strand, within BWI76_RS22875 at 4773.434 kb on + strand, within BWI76_RS22875 at 4773.515 kb on - strand, within BWI76_RS22875 at 4773.542 kb on + strand, within BWI76_RS22875 at 4773.624 kb on + strand, within BWI76_RS22875 at 4773.632 kb on - strand, within BWI76_RS22875 at 4773.886 kb on + strand, within BWI76_RS22875 at 4773.947 kb on + strand at 4774.100 kb on + strand at 4774.168 kb on + strand at 4774.223 kb on - strand at 4774.382 kb on - strand, within BWI76_RS22880 at 4774.501 kb on + strand, within BWI76_RS22880 at 4775.082 kb on + strand, within BWI76_RS22880 at 4775.252 kb on + strand, within BWI76_RS22880 at 4775.255 kb on - strand, within BWI76_RS22880 at 4775.356 kb on - strand at 4775.824 kb on - strand, within BWI76_RS22885 at 4775.934 kb on - strand, within BWI76_RS22885 at 4775.944 kb on - strand, within BWI76_RS22885 at 4776.081 kb on + strand, within BWI76_RS22885 at 4776.086 kb on + strand, within BWI76_RS22885 at 4776.117 kb on + strand, within BWI76_RS22885 at 4776.171 kb on + strand, within BWI76_RS22885 at 4776.249 kb on - strand, within BWI76_RS22885 at 4776.256 kb on - strand, within BWI76_RS22885 at 4776.266 kb on + strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.267 kb on - strand, within BWI76_RS22885 at 4776.459 kb on + strand, within BWI76_RS22885
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 4,773,154 + BWI76_RS22875 0.29 +1.6 4,773,274 + BWI76_RS22875 0.38 +0.5 4,773,371 - BWI76_RS22875 0.46 -1.1 4,773,434 + BWI76_RS22875 0.51 +1.0 4,773,515 - BWI76_RS22875 0.57 -0.0 4,773,542 + BWI76_RS22875 0.59 +1.5 4,773,624 + BWI76_RS22875 0.66 -1.1 4,773,632 - BWI76_RS22875 0.66 -0.8 4,773,886 + BWI76_RS22875 0.86 +0.5 4,773,947 + +0.7 4,774,100 + +0.2 4,774,168 + +0.2 4,774,223 - -0.6 4,774,382 - BWI76_RS22880 0.19 -0.2 4,774,501 + BWI76_RS22880 0.28 -1.3 4,775,082 + BWI76_RS22880 0.70 +0.2 4,775,252 + BWI76_RS22880 0.83 -2.3 4,775,255 - BWI76_RS22880 0.83 -0.8 4,775,356 - +0.2 4,775,824 - BWI76_RS22885 0.20 -0.4 4,775,934 - BWI76_RS22885 0.31 -0.6 4,775,944 - BWI76_RS22885 0.32 -1.3 4,776,081 + BWI76_RS22885 0.47 +0.5 4,776,086 + BWI76_RS22885 0.48 -2.2 4,776,117 + BWI76_RS22885 0.51 +0.2 4,776,171 + BWI76_RS22885 0.57 -1.8 4,776,249 - BWI76_RS22885 0.65 -1.2 4,776,256 - BWI76_RS22885 0.66 -0.4 4,776,266 + BWI76_RS22885 0.67 +0.1 4,776,266 - BWI76_RS22885 0.67 +1.0 4,776,266 - BWI76_RS22885 0.67 +1.8 4,776,267 - BWI76_RS22885 0.67 +0.8 4,776,459 + BWI76_RS22885 0.87 -1.3
Or see this region's nucleotide sequence