Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22880

Experiment: Uridine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22875 and BWI76_RS22880 are separated by 53 nucleotidesBWI76_RS22880 and BWI76_RS22885 are separated by 149 nucleotides BWI76_RS22875: BWI76_RS22875 - serine transporter, at 4,772,778 to 4,774,067 _RS22875 BWI76_RS22880: BWI76_RS22880 - L-serine ammonia-lyase, at 4,774,121 to 4,775,488 _RS22880 BWI76_RS22885: BWI76_RS22885 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,775,638 to 4,776,579 _RS22885 Position (kb) 4774 4775 4776Strain fitness (log2 ratio) -2 -1 0 1 2at 4773.154 kb on + strand, within BWI76_RS22875at 4773.274 kb on + strand, within BWI76_RS22875at 4773.371 kb on - strand, within BWI76_RS22875at 4773.434 kb on + strand, within BWI76_RS22875at 4773.515 kb on - strand, within BWI76_RS22875at 4773.542 kb on + strand, within BWI76_RS22875at 4773.624 kb on + strand, within BWI76_RS22875at 4773.632 kb on - strand, within BWI76_RS22875at 4773.886 kb on + strand, within BWI76_RS22875at 4773.947 kb on + strandat 4774.100 kb on + strandat 4774.168 kb on + strandat 4774.223 kb on - strandat 4774.382 kb on - strand, within BWI76_RS22880at 4774.501 kb on + strand, within BWI76_RS22880at 4775.082 kb on + strand, within BWI76_RS22880at 4775.252 kb on + strand, within BWI76_RS22880at 4775.255 kb on - strand, within BWI76_RS22880at 4775.356 kb on - strandat 4775.824 kb on - strand, within BWI76_RS22885at 4775.934 kb on - strand, within BWI76_RS22885at 4775.944 kb on - strand, within BWI76_RS22885at 4776.081 kb on + strand, within BWI76_RS22885at 4776.086 kb on + strand, within BWI76_RS22885at 4776.117 kb on + strand, within BWI76_RS22885at 4776.171 kb on + strand, within BWI76_RS22885at 4776.249 kb on - strand, within BWI76_RS22885at 4776.256 kb on - strand, within BWI76_RS22885at 4776.266 kb on + strand, within BWI76_RS22885at 4776.266 kb on - strand, within BWI76_RS22885at 4776.266 kb on - strand, within BWI76_RS22885at 4776.267 kb on - strand, within BWI76_RS22885at 4776.459 kb on + strand, within BWI76_RS22885

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (N)
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4,773,154 + BWI76_RS22875 0.29 +1.6
4,773,274 + BWI76_RS22875 0.38 +0.5
4,773,371 - BWI76_RS22875 0.46 -1.1
4,773,434 + BWI76_RS22875 0.51 +1.0
4,773,515 - BWI76_RS22875 0.57 -0.0
4,773,542 + BWI76_RS22875 0.59 +1.5
4,773,624 + BWI76_RS22875 0.66 -1.1
4,773,632 - BWI76_RS22875 0.66 -0.8
4,773,886 + BWI76_RS22875 0.86 +0.5
4,773,947 + +0.7
4,774,100 + +0.2
4,774,168 + +0.2
4,774,223 - -0.6
4,774,382 - BWI76_RS22880 0.19 -0.2
4,774,501 + BWI76_RS22880 0.28 -1.3
4,775,082 + BWI76_RS22880 0.70 +0.2
4,775,252 + BWI76_RS22880 0.83 -2.3
4,775,255 - BWI76_RS22880 0.83 -0.8
4,775,356 - +0.2
4,775,824 - BWI76_RS22885 0.20 -0.4
4,775,934 - BWI76_RS22885 0.31 -0.6
4,775,944 - BWI76_RS22885 0.32 -1.3
4,776,081 + BWI76_RS22885 0.47 +0.5
4,776,086 + BWI76_RS22885 0.48 -2.2
4,776,117 + BWI76_RS22885 0.51 +0.2
4,776,171 + BWI76_RS22885 0.57 -1.8
4,776,249 - BWI76_RS22885 0.65 -1.2
4,776,256 - BWI76_RS22885 0.66 -0.4
4,776,266 + BWI76_RS22885 0.67 +0.1
4,776,266 - BWI76_RS22885 0.67 +1.0
4,776,266 - BWI76_RS22885 0.67 +1.8
4,776,267 - BWI76_RS22885 0.67 +0.8
4,776,459 + BWI76_RS22885 0.87 -1.3

Or see this region's nucleotide sequence