Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18040 and BWI76_RS18045 are separated by 14 nucleotides BWI76_RS18045 and BWI76_RS18050 are separated by 384 nucleotides BWI76_RS18050 and BWI76_RS18055 are separated by 16 nucleotides
BWI76_RS18040: BWI76_RS18040 - fimbrial assembly protein, at 3,748,032 to 3,750,362
_RS18040
BWI76_RS18045: BWI76_RS18045 - spore coat U domain-containing protein, at 3,750,377 to 3,751,336
_RS18045
BWI76_RS18050: BWI76_RS18050 - hypothetical protein, at 3,751,721 to 3,752,059
_RS18050
BWI76_RS18055: BWI76_RS18055 - copper resistance protein D, at 3,752,076 to 3,752,945
_RS18055
Position (kb)
3750
3751
3752 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3749.593 kb on + strand, within BWI76_RS18040 at 3749.601 kb on - strand, within BWI76_RS18040 at 3749.694 kb on - strand, within BWI76_RS18040 at 3750.140 kb on - strand at 3750.269 kb on - strand at 3750.397 kb on - strand at 3750.406 kb on + strand at 3750.457 kb on + strand at 3750.494 kb on + strand, within BWI76_RS18045 at 3750.509 kb on + strand, within BWI76_RS18045 at 3750.655 kb on + strand, within BWI76_RS18045 at 3750.690 kb on - strand, within BWI76_RS18045 at 3750.719 kb on - strand, within BWI76_RS18045 at 3750.726 kb on + strand, within BWI76_RS18045 at 3750.734 kb on - strand, within BWI76_RS18045 at 3750.920 kb on + strand, within BWI76_RS18045 at 3750.928 kb on - strand, within BWI76_RS18045 at 3751.332 kb on + strand at 3751.492 kb on + strand at 3751.512 kb on + strand at 3751.548 kb on + strand at 3751.796 kb on - strand, within BWI76_RS18050 at 3751.922 kb on + strand, within BWI76_RS18050 at 3751.977 kb on - strand, within BWI76_RS18050 at 3751.977 kb on - strand, within BWI76_RS18050 at 3752.115 kb on - strand at 3752.163 kb on + strand, within BWI76_RS18055
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 3,749,593 + BWI76_RS18040 0.67 -0.8 3,749,601 - BWI76_RS18040 0.67 +0.2 3,749,694 - BWI76_RS18040 0.71 -0.1 3,750,140 - -0.3 3,750,269 - -0.2 3,750,397 - +0.8 3,750,406 + -1.5 3,750,457 + -2.8 3,750,494 + BWI76_RS18045 0.12 -1.3 3,750,509 + BWI76_RS18045 0.14 +0.1 3,750,655 + BWI76_RS18045 0.29 -0.6 3,750,690 - BWI76_RS18045 0.33 +0.2 3,750,719 - BWI76_RS18045 0.36 -1.2 3,750,726 + BWI76_RS18045 0.36 -4.2 3,750,734 - BWI76_RS18045 0.37 +0.7 3,750,920 + BWI76_RS18045 0.57 +0.4 3,750,928 - BWI76_RS18045 0.57 +0.6 3,751,332 + -1.8 3,751,492 + +1.1 3,751,512 + +1.0 3,751,548 + +0.2 3,751,796 - BWI76_RS18050 0.22 -0.5 3,751,922 + BWI76_RS18050 0.59 -1.3 3,751,977 - BWI76_RS18050 0.76 -2.3 3,751,977 - BWI76_RS18050 0.76 -0.6 3,752,115 - +1.7 3,752,163 + BWI76_RS18055 0.10 -0.2
Or see this region's nucleotide sequence