Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11710

Experiment: Uridine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11705 and BWI76_RS11710 are separated by 34 nucleotidesBWI76_RS11710 and BWI76_RS11715 are separated by 102 nucleotides BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517 _RS11705 BWI76_RS11710: BWI76_RS11710 - nucleotide excision repair endonuclease, at 2,464,552 to 2,465,412 _RS11710 BWI76_RS11715: BWI76_RS11715 - NAD(+) synthetase, at 2,465,515 to 2,466,342 _RS11715 Position (kb) 2464 2465 2466Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2463.739 kb on + strand, within BWI76_RS11705at 2464.134 kb on - strand, within BWI76_RS11705at 2464.152 kb on + strand, within BWI76_RS11705at 2464.354 kb on + strandat 2464.364 kb on + strandat 2464.364 kb on - strandat 2464.443 kb on - strandat 2464.458 kb on - strandat 2464.567 kb on - strandat 2464.988 kb on - strand, within BWI76_RS11710at 2465.039 kb on - strand, within BWI76_RS11710at 2465.052 kb on + strand, within BWI76_RS11710at 2465.137 kb on - strand, within BWI76_RS11710at 2466.391 kb on - strandat 2466.391 kb on - strandat 2466.391 kb on - strandat 2466.402 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (N)
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2,463,739 + BWI76_RS11705 0.62 -3.1
2,464,134 - BWI76_RS11705 0.81 +0.2
2,464,152 + BWI76_RS11705 0.82 -0.5
2,464,354 + -3.9
2,464,364 + +0.3
2,464,364 - +0.9
2,464,443 - +1.1
2,464,458 - -1.1
2,464,567 - -0.8
2,464,988 - BWI76_RS11710 0.51 +1.0
2,465,039 - BWI76_RS11710 0.57 -0.0
2,465,052 + BWI76_RS11710 0.58 -0.8
2,465,137 - BWI76_RS11710 0.68 +1.9
2,466,391 - -2.2
2,466,391 - +0.6
2,466,391 - +0.6
2,466,402 - +0.5

Or see this region's nucleotide sequence