Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10740 and BWI76_RS10745 are separated by 374 nucleotides BWI76_RS10745 and BWI76_RS10750 are separated by 258 nucleotides BWI76_RS10750 and BWI76_RS10755 are separated by 21 nucleotides BWI76_RS10755 and BWI76_RS10760 are separated by 9 nucleotides
BWI76_RS10740: BWI76_RS10740 - NAD(P)H:quinone oxidoreductase, at 2,269,105 to 2,269,701
_RS10740
BWI76_RS10745: BWI76_RS10745 - hypothetical protein, at 2,270,076 to 2,270,249
_RS10745
BWI76_RS10750: BWI76_RS10750 - pyrimidine utilization transport protein G, at 2,270,508 to 2,271,830
_RS10750
BWI76_RS10755: BWI76_RS10755 - pyrimidine utilization flavin reductase protein F, at 2,271,852 to 2,272,346
_RS10755
BWI76_RS10760: BWI76_RS10760 - nitroreductase family protein, at 2,272,356 to 2,272,946
_RS10760
Position (kb)
2270
2271
2272 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 2269.610 kb on - strand, within BWI76_RS10740 at 2269.634 kb on - strand, within BWI76_RS10740 at 2269.652 kb on + strand at 2269.881 kb on - strand at 2269.988 kb on - strand at 2270.016 kb on + strand at 2270.024 kb on - strand at 2270.035 kb on + strand at 2270.159 kb on - strand, within BWI76_RS10745 at 2270.275 kb on + strand at 2270.282 kb on - strand at 2270.551 kb on + strand at 2270.668 kb on + strand, within BWI76_RS10750 at 2270.714 kb on - strand, within BWI76_RS10750 at 2270.872 kb on - strand, within BWI76_RS10750 at 2271.104 kb on - strand, within BWI76_RS10750 at 2271.359 kb on + strand, within BWI76_RS10750 at 2271.479 kb on + strand, within BWI76_RS10750 at 2271.499 kb on + strand, within BWI76_RS10750 at 2271.507 kb on - strand, within BWI76_RS10750 at 2271.852 kb on - strand at 2271.911 kb on + strand, within BWI76_RS10755 at 2272.362 kb on - strand at 2272.685 kb on - strand, within BWI76_RS10760 at 2272.734 kb on + strand, within BWI76_RS10760 at 2272.741 kb on + strand, within BWI76_RS10760 at 2272.742 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 2,269,610 - BWI76_RS10740 0.85 +0.2 2,269,634 - BWI76_RS10740 0.89 -1.4 2,269,652 + +0.3 2,269,881 - +0.9 2,269,988 - +0.7 2,270,016 + +1.9 2,270,024 - -0.1 2,270,035 + -0.4 2,270,159 - BWI76_RS10745 0.48 -1.3 2,270,275 + -0.0 2,270,282 - -1.5 2,270,551 + +0.1 2,270,668 + BWI76_RS10750 0.12 -2.9 2,270,714 - BWI76_RS10750 0.16 -2.1 2,270,872 - BWI76_RS10750 0.28 -3.1 2,271,104 - BWI76_RS10750 0.45 -0.3 2,271,359 + BWI76_RS10750 0.64 +2.1 2,271,479 + BWI76_RS10750 0.73 -0.3 2,271,499 + BWI76_RS10750 0.75 -0.8 2,271,507 - BWI76_RS10750 0.76 -1.2 2,271,852 - -4.0 2,271,911 + BWI76_RS10755 0.12 -4.0 2,272,362 - -4.2 2,272,685 - BWI76_RS10760 0.56 -6.2 2,272,734 + BWI76_RS10760 0.64 -3.5 2,272,741 + BWI76_RS10760 0.65 -2.6 2,272,742 - +0.1
Or see this region's nucleotide sequence