Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06050 and BWI76_RS06055 are separated by 84 nucleotides BWI76_RS06055 and BWI76_RS06060 overlap by 1 nucleotides BWI76_RS06060 and BWI76_RS06065 are separated by 252 nucleotides
BWI76_RS06050: BWI76_RS06050 - MFS transporter family glucose-6-phosphate receptor UhpC, at 1,271,089 to 1,272,390
_RS06050
BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016
_RS06055
BWI76_RS06060: BWI76_RS06060 - DNA-binding response regulator, at 1,274,016 to 1,274,645
_RS06060
BWI76_RS06065: BWI76_RS06065 - taurine ABC transporter substrate-binding protein, at 1,274,898 to 1,275,860
_RS06065
Position (kb)
1272
1273
1274
1275 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1271.579 kb on + strand, within BWI76_RS06050 at 1271.579 kb on - strand, within BWI76_RS06050 at 1271.608 kb on - strand, within BWI76_RS06050 at 1271.804 kb on + strand, within BWI76_RS06050 at 1271.951 kb on - strand at 1271.990 kb on - strand, within BWI76_RS06050 at 1272.008 kb on + strand, within BWI76_RS06050 at 1272.205 kb on - strand, within BWI76_RS06050 at 1272.238 kb on - strand, within BWI76_RS06050 at 1272.456 kb on + strand at 1272.544 kb on + strand at 1272.563 kb on + strand at 1272.642 kb on + strand, within BWI76_RS06055 at 1272.666 kb on + strand, within BWI76_RS06055 at 1272.721 kb on + strand, within BWI76_RS06055 at 1273.045 kb on + strand, within BWI76_RS06055 at 1273.642 kb on - strand, within BWI76_RS06055 at 1273.658 kb on + strand, within BWI76_RS06055 at 1273.659 kb on - strand, within BWI76_RS06055 at 1273.719 kb on - strand, within BWI76_RS06055 at 1273.961 kb on + strand at 1274.161 kb on - strand, within BWI76_RS06060 at 1274.461 kb on - strand, within BWI76_RS06060 at 1274.487 kb on - strand, within BWI76_RS06060 at 1274.529 kb on + strand, within BWI76_RS06060 at 1274.550 kb on - strand, within BWI76_RS06060 at 1274.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 1,271,579 + BWI76_RS06050 0.38 +0.1 1,271,579 - BWI76_RS06050 0.38 -0.3 1,271,608 - BWI76_RS06050 0.40 +0.9 1,271,804 + BWI76_RS06050 0.55 -0.6 1,271,951 - +0.5 1,271,990 - BWI76_RS06050 0.69 +0.1 1,272,008 + BWI76_RS06050 0.71 +0.4 1,272,205 - BWI76_RS06050 0.86 -2.4 1,272,238 - BWI76_RS06050 0.88 +0.0 1,272,456 + -0.4 1,272,544 + +0.5 1,272,563 + -0.0 1,272,642 + BWI76_RS06055 0.11 +0.6 1,272,666 + BWI76_RS06055 0.12 +0.0 1,272,721 + BWI76_RS06055 0.16 -2.9 1,273,045 + BWI76_RS06055 0.37 -0.2 1,273,642 - BWI76_RS06055 0.76 -3.0 1,273,658 + BWI76_RS06055 0.77 +0.1 1,273,659 - BWI76_RS06055 0.77 -0.3 1,273,719 - BWI76_RS06055 0.81 -0.7 1,273,961 + +0.0 1,274,161 - BWI76_RS06060 0.23 +1.1 1,274,461 - BWI76_RS06060 0.71 +1.1 1,274,487 - BWI76_RS06060 0.75 +1.4 1,274,529 + BWI76_RS06060 0.81 +1.4 1,274,550 - BWI76_RS06060 0.85 +2.0 1,274,990 - +1.3
Or see this region's nucleotide sequence