Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00760 and BWI76_RS00765 are separated by 91 nucleotides BWI76_RS00765 and BWI76_RS00770 are separated by 150 nucleotides
BWI76_RS00760: BWI76_RS00760 - cell division protein FtsN, at 154,237 to 155,211
_RS00760
BWI76_RS00765: BWI76_RS00765 - DNA-binding transcriptional regulator CytR, at 155,303 to 156,331
_RS00765
BWI76_RS00770: BWI76_RS00770 - primosomal protein N', at 156,482 to 158,677
_RS00770
Position (kb) 155
156
157 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 154.369 kb on - strand, within BWI76_RS00760 at 154.417 kb on - strand, within BWI76_RS00760 at 154.532 kb on + strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.565 kb on - strand, within BWI76_RS00760 at 155.382 kb on - strand at 155.397 kb on + strand at 155.521 kb on + strand, within BWI76_RS00765 at 155.521 kb on + strand, within BWI76_RS00765 at 155.973 kb on - strand, within BWI76_RS00765 at 156.005 kb on + strand, within BWI76_RS00765 at 156.005 kb on + strand, within BWI76_RS00765 at 156.005 kb on + strand, within BWI76_RS00765 at 156.041 kb on + strand, within BWI76_RS00765 at 156.059 kb on + strand, within BWI76_RS00765 at 156.362 kb on + strand at 156.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 154,369 - BWI76_RS00760 0.14 -2.7 154,417 - BWI76_RS00760 0.18 -0.0 154,532 + BWI76_RS00760 0.30 -3.9 154,540 - BWI76_RS00760 0.31 +0.5 154,540 - BWI76_RS00760 0.31 -3.3 154,540 - BWI76_RS00760 0.31 +0.1 154,565 - BWI76_RS00760 0.34 -2.6 155,382 - +2.2 155,397 + +3.1 155,521 + BWI76_RS00765 0.21 +1.4 155,521 + BWI76_RS00765 0.21 +2.6 155,973 - BWI76_RS00765 0.65 +1.7 156,005 + BWI76_RS00765 0.68 +2.1 156,005 + BWI76_RS00765 0.68 +2.9 156,005 + BWI76_RS00765 0.68 +3.0 156,041 + BWI76_RS00765 0.72 +1.5 156,059 + BWI76_RS00765 0.73 +1.9 156,362 + +3.3 156,487 - +0.2
Or see this region's nucleotide sequence