Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4164 and Ga0059261_4165 are separated by 1 nucleotides Ga0059261_4165 and Ga0059261_4166 are separated by 246 nucleotides Ga0059261_4166 and Ga0059261_4167 overlap by 4 nucleotides Ga0059261_4167 and Ga0059261_4168 are separated by 48 nucleotides
Ga0059261_4164: Ga0059261_4164 - tRNA (guanine-N1)-methyltransferase, at 4,316,224 to 4,316,952
_4164
Ga0059261_4165: Ga0059261_4165 - ribosomal protein L19, bacterial type, at 4,316,954 to 4,317,346
_4165
Ga0059261_4166: Ga0059261_4166 - hypothetical protein, at 4,317,593 to 4,318,009
_4166
Ga0059261_4167: Ga0059261_4167 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 4,318,006 to 4,318,572
_4167
Ga0059261_4168: Ga0059261_4168 - hypothetical protein, at 4,318,621 to 4,319,019
_4168
Position (kb)
4317
4318
4319 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4316.623 kb on + strand, within Ga0059261_4164 at 4316.624 kb on - strand, within Ga0059261_4164 at 4316.624 kb on - strand at 4317.344 kb on + strand at 4317.344 kb on + strand at 4317.345 kb on - strand at 4317.345 kb on - strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.434 kb on + strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.435 kb on - strand at 4317.734 kb on + strand, within Ga0059261_4166 at 4317.734 kb on + strand, within Ga0059261_4166 at 4317.734 kb on + strand, within Ga0059261_4166 at 4317.734 kb on + strand, within Ga0059261_4166 at 4317.734 kb on + strand, within Ga0059261_4166 at 4317.735 kb on - strand, within Ga0059261_4166 at 4317.735 kb on - strand, within Ga0059261_4166 at 4317.735 kb on - strand, within Ga0059261_4166 at 4317.735 kb on - strand, within Ga0059261_4166 at 4317.735 kb on - strand, within Ga0059261_4166 at 4317.737 kb on - strand, within Ga0059261_4166 at 4317.737 kb on - strand, within Ga0059261_4166 at 4317.737 kb on - strand, within Ga0059261_4166 at 4317.758 kb on + strand, within Ga0059261_4166 at 4317.758 kb on + strand, within Ga0059261_4166 at 4317.758 kb on + strand, within Ga0059261_4166 at 4317.758 kb on + strand, within Ga0059261_4166 at 4317.758 kb on + strand, within Ga0059261_4166 at 4317.759 kb on - strand, within Ga0059261_4166 at 4317.865 kb on + strand, within Ga0059261_4166 at 4317.954 kb on + strand, within Ga0059261_4166 at 4317.954 kb on + strand, within Ga0059261_4166 at 4317.955 kb on - strand, within Ga0059261_4166 at 4318.113 kb on + strand, within Ga0059261_4167 at 4318.114 kb on - strand, within Ga0059261_4167 at 4318.307 kb on + strand, within Ga0059261_4167 at 4318.307 kb on + strand, within Ga0059261_4167 at 4318.307 kb on + strand, within Ga0059261_4167 at 4318.307 kb on + strand, within Ga0059261_4167 at 4318.307 kb on + strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.308 kb on - strand, within Ga0059261_4167 at 4318.347 kb on + strand, within Ga0059261_4167 at 4318.372 kb on + strand, within Ga0059261_4167 at 4318.372 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.374 kb on + strand, within Ga0059261_4167 at 4318.375 kb on - strand, within Ga0059261_4167 at 4318.375 kb on - strand, within Ga0059261_4167 at 4318.453 kb on + strand, within Ga0059261_4167 at 4318.609 kb on + strand at 4318.609 kb on + strand at 4318.609 kb on + strand at 4318.609 kb on + strand at 4318.609 kb on + strand at 4318.610 kb on - strand at 4318.610 kb on - strand at 4318.610 kb on - strand at 4318.922 kb on - strand, within Ga0059261_4168
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,316,623 + Ga0059261_4164 0.55 +0.2 4,316,624 - Ga0059261_4164 0.55 +1.6 4,316,624 - +0.8 4,317,344 + -0.4 4,317,344 + -0.6 4,317,345 - +0.8 4,317,345 - -0.3 4,317,434 + -0.5 4,317,434 + -0.6 4,317,434 + +0.4 4,317,434 + +1.3 4,317,434 + -0.7 4,317,434 + -0.2 4,317,434 + +0.3 4,317,434 + +0.4 4,317,434 + +0.0 4,317,434 + -0.1 4,317,435 - -0.1 4,317,435 - +0.3 4,317,435 - -1.1 4,317,435 - +0.9 4,317,435 - +0.9 4,317,435 - +0.5 4,317,435 - -2.9 4,317,435 - -0.5 4,317,435 - +0.4 4,317,734 + Ga0059261_4166 0.34 +0.3 4,317,734 + Ga0059261_4166 0.34 -0.1 4,317,734 + Ga0059261_4166 0.34 -0.6 4,317,734 + Ga0059261_4166 0.34 +0.7 4,317,734 + Ga0059261_4166 0.34 -0.3 4,317,735 - Ga0059261_4166 0.34 +0.6 4,317,735 - Ga0059261_4166 0.34 -0.2 4,317,735 - Ga0059261_4166 0.34 +0.3 4,317,735 - Ga0059261_4166 0.34 +0.5 4,317,735 - Ga0059261_4166 0.34 -0.3 4,317,737 - Ga0059261_4166 0.35 -0.2 4,317,737 - Ga0059261_4166 0.35 +0.4 4,317,737 - Ga0059261_4166 0.35 +1.0 4,317,758 + Ga0059261_4166 0.40 +0.6 4,317,758 + Ga0059261_4166 0.40 +0.6 4,317,758 + Ga0059261_4166 0.40 -0.7 4,317,758 + Ga0059261_4166 0.40 +0.4 4,317,758 + Ga0059261_4166 0.40 +0.1 4,317,759 - Ga0059261_4166 0.40 +0.4 4,317,865 + Ga0059261_4166 0.65 -1.0 4,317,954 + Ga0059261_4166 0.87 +1.0 4,317,954 + Ga0059261_4166 0.87 +0.3 4,317,955 - Ga0059261_4166 0.87 +0.2 4,318,113 + Ga0059261_4167 0.19 +1.5 4,318,114 - Ga0059261_4167 0.19 -0.7 4,318,307 + Ga0059261_4167 0.53 -0.5 4,318,307 + Ga0059261_4167 0.53 -0.9 4,318,307 + Ga0059261_4167 0.53 -0.2 4,318,307 + Ga0059261_4167 0.53 +0.1 4,318,307 + Ga0059261_4167 0.53 +0.4 4,318,308 - Ga0059261_4167 0.53 +0.8 4,318,308 - Ga0059261_4167 0.53 +0.4 4,318,308 - Ga0059261_4167 0.53 +0.7 4,318,308 - Ga0059261_4167 0.53 -1.9 4,318,308 - Ga0059261_4167 0.53 +0.5 4,318,308 - Ga0059261_4167 0.53 -0.4 4,318,347 + Ga0059261_4167 0.60 +1.0 4,318,372 + Ga0059261_4167 0.65 +0.3 4,318,372 + Ga0059261_4167 0.65 -1.5 4,318,374 + Ga0059261_4167 0.65 +0.6 4,318,374 + Ga0059261_4167 0.65 -0.1 4,318,374 + Ga0059261_4167 0.65 -1.5 4,318,374 + Ga0059261_4167 0.65 +0.7 4,318,374 + Ga0059261_4167 0.65 -0.0 4,318,374 + Ga0059261_4167 0.65 +0.6 4,318,375 - Ga0059261_4167 0.65 -0.0 4,318,375 - Ga0059261_4167 0.65 +0.6 4,318,453 + Ga0059261_4167 0.79 -0.3 4,318,609 + -1.0 4,318,609 + +0.2 4,318,609 + +0.1 4,318,609 + +0.2 4,318,609 + -0.2 4,318,610 - +0.8 4,318,610 - +0.8 4,318,610 - -0.4 4,318,922 - Ga0059261_4168 0.75 -0.0
Or see this region's nucleotide sequence