Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20610 and BWI76_RS20615 are separated by 89 nucleotides BWI76_RS20615 and BWI76_RS20620 overlap by 4 nucleotides BWI76_RS20620 and BWI76_RS20625 overlap by 8 nucleotides
BWI76_RS20610: BWI76_RS20610 - LysR family transcriptional regulator, at 4,312,740 to 4,313,666
_RS20610
BWI76_RS20615: BWI76_RS20615 - sodium symporter, at 4,313,756 to 4,314,754
_RS20615
BWI76_RS20620: BWI76_RS20620 - negative regulator, at 4,314,751 to 4,314,969
_RS20620
BWI76_RS20625: BWI76_RS20625 - DNA ligase (NAD(+)) LigA, at 4,314,962 to 4,316,986
_RS20625
Position (kb) 4313
4314
4315 Strain fitness (log2 ratio) -1
0
1 at 4313.394 kb on - strand, within BWI76_RS20610 at 4313.416 kb on + strand, within BWI76_RS20610 at 4313.476 kb on + strand, within BWI76_RS20610 at 4313.493 kb on - strand, within BWI76_RS20610 at 4313.530 kb on - strand, within BWI76_RS20610 at 4313.582 kb on + strand at 4313.590 kb on - strand at 4313.602 kb on - strand at 4313.924 kb on - strand, within BWI76_RS20615 at 4314.152 kb on + strand, within BWI76_RS20615 at 4314.227 kb on + strand, within BWI76_RS20615 at 4314.234 kb on + strand, within BWI76_RS20615 at 4314.242 kb on - strand, within BWI76_RS20615 at 4314.604 kb on + strand, within BWI76_RS20615 at 4314.673 kb on - strand at 4314.769 kb on - strand at 4314.769 kb on - strand at 4314.784 kb on + strand, within BWI76_RS20620
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 4,313,394 - BWI76_RS20610 0.71 +1.0 4,313,416 + BWI76_RS20610 0.73 +0.3 4,313,476 + BWI76_RS20610 0.79 +1.5 4,313,493 - BWI76_RS20610 0.81 +0.0 4,313,530 - BWI76_RS20610 0.85 -0.2 4,313,582 + -0.2 4,313,590 - +0.1 4,313,602 - +0.4 4,313,924 - BWI76_RS20615 0.17 -1.0 4,314,152 + BWI76_RS20615 0.40 -0.7 4,314,227 + BWI76_RS20615 0.47 +0.5 4,314,234 + BWI76_RS20615 0.48 -1.0 4,314,242 - BWI76_RS20615 0.49 +0.2 4,314,604 + BWI76_RS20615 0.85 -1.1 4,314,673 - -1.1 4,314,769 - -1.0 4,314,769 - -0.4 4,314,784 + BWI76_RS20620 0.15 +1.4
Or see this region's nucleotide sequence