Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18090

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,074,895	-		AO356_18080	0.84	-0.7
4,074,895	-		AO356_18080	0.84	+0.5
4,074,914	+		AO356_18080	0.86	+1.5
4,074,914	+		AO356_18080	0.86	+0.2
4,074,914	+		AO356_18080	0.86	-0.2
4,074,914	+		AO356_18080	0.86	+1.2
4,074,914	+		AO356_18080	0.86	-0.0
4,074,915	-		AO356_18080	0.86	-0.0
4,074,915	-		AO356_18080	0.86	-1.7
4,074,915	-		AO356_18080	0.86	+1.9
4,074,915	-		AO356_18080	0.86	-0.6
4,074,915	-		AO356_18080	0.86	-0.1
4,074,919	+		AO356_18080	0.87	+0.5
4,074,920	-		AO356_18080	0.87	-0.2
4,074,920	-		AO356_18080	0.87	-1.2
4,074,977	+				+2.0
4,074,977	+				+0.8
4,074,977	+				+0.4
4,074,977	+				+1.0
4,074,978	-				-3.0
4,074,978	-				-1.9
4,075,020	+				-0.9
4,075,021	-				+1.4
4,075,026	+				-0.4
4,075,027	-				+1.1
4,075,027	-				+1.6
4,075,027	-				+0.3
4,075,027	-				-0.9
4,075,029	+				+1.3
4,075,030	-				-1.5
4,075,030	-				-2.4
4,075,030	-				-0.9
4,075,030	-				+1.2
4,075,041	+				-0.6
4,075,042	-				-1.2
4,075,042	-				-1.1
4,075,071	+				+0.8
4,075,088	-				-0.6
4,075,088	-				-1.7
4,075,192	+				+0.5
4,075,193	-				+1.1
4,075,193	-				+0.5
4,075,221	+				-0.2
4,075,221	+				-1.7
4,075,222	-				+0.5
4,075,222	-				+1.4
4,075,237	+				-1.3
4,075,237	+				+0.2
4,075,272	+				-0.9
4,075,272	+				-1.1
4,075,272	+				+0.1
4,075,273	-				+1.9
4,075,295	+		AO356_18085	0.13	+2.6
4,075,378	+		AO356_18085	0.27	+1.5
4,075,415	+		AO356_18085	0.33	-0.1
4,075,415	+		AO356_18085	0.33	+1.2
4,075,415	+		AO356_18085	0.33	-0.7
4,075,415	+		AO356_18085	0.33	+0.8
4,075,577	+		AO356_18085	0.59	-1.0
4,075,578	-		AO356_18085	0.59	+0.5
4,075,703	+		AO356_18085	0.79	+2.3
4,075,703	+		AO356_18085	0.79	-1.1
4,075,703	+		AO356_18085	0.79	-1.8
4,075,703	+		AO356_18085	0.79	+0.2
4,075,703	+		AO356_18085	0.79	+0.8
4,075,704	-		AO356_18085	0.79	+0.8
4,075,704	-		AO356_18085	0.79	+0.7
4,075,704	-		AO356_18085	0.79	-1.7
4,075,704	-		AO356_18085	0.79	+0.5
4,075,704	-		AO356_18085	0.79	+0.8
4,075,704	-		AO356_18085	0.79	-1.2
4,075,704	-		AO356_18085	0.79	+0.4
4,075,704	-		AO356_18085	0.79	-0.2
4,075,780	+				-1.2
4,075,780	+				-1.2
4,075,780	+				+1.9
4,075,780	+				+1.4
4,075,780	+				+0.7
4,075,780	+				-0.1
4,075,781	-				+1.1
4,075,781	-				-0.6
4,075,842	+				+0.1
4,075,843	-				+0.6
4,075,853	+				+0.5
4,075,853	+				+1.2
4,075,853	+				-0.0
4,075,853	+				+0.6
4,075,854	-				+1.7
4,075,936	+				-0.1
4,075,936	+				+1.7
4,075,937	-				+0.8
4,076,006	-		AO356_18090	0.11	-0.6
4,076,476	+		AO356_18090	0.41	+0.6
4,076,477	-		AO356_18090	0.41	+0.3
4,076,700	+		AO356_18090	0.56	+0.4
4,076,700	+		AO356_18090	0.56	-0.8
4,076,727	+		AO356_18090	0.57	+2.5
4,076,768	+		AO356_18090	0.60	+1.3
4,076,768	+		AO356_18090	0.60	+0.4
4,076,768	+		AO356_18090	0.60	+0.5
4,076,768	+		AO356_18090	0.60	-0.4
4,076,769	-		AO356_18090	0.60	+1.1
4,076,769	-		AO356_18090	0.60	-1.8
4,076,769	-		AO356_18090	0.60	+1.1
4,076,769	-		AO356_18090	0.60	+2.2
4,076,769	-		AO356_18090	0.60	+0.1
4,076,770	+		AO356_18090	0.60	-0.8
4,076,770	+		AO356_18090	0.60	-0.1
4,076,770	+		AO356_18090	0.60	-1.6
4,076,770	+		AO356_18090	0.60	-1.4
4,076,770	+		AO356_18090	0.60	+1.3
4,076,771	-		AO356_18090	0.60	-0.5
4,076,938	-		AO356_18090	0.71	+2.3
4,077,016	+		AO356_18090	0.76	+0.9
4,077,016	+		AO356_18090	0.76	-1.8
4,077,017	-		AO356_18090	0.76	+0.7
4,077,017	-		AO356_18090	0.76	+0.2
4,077,017	-		AO356_18090	0.76	+1.4
4,077,017	-		AO356_18090	0.76	+0.4
4,077,022	+		AO356_18090	0.76	-2.1
4,077,022	+		AO356_18090	0.76	+1.1
4,077,022	+		AO356_18090	0.76	-0.6
4,077,022	+		AO356_18090	0.76	+1.5
4,077,022	+		AO356_18090	0.76	-0.5
4,077,022	+		AO356_18090	0.76	+0.4
4,077,022	+		AO356_18090	0.76	-0.3
4,077,023	-		AO356_18090	0.76	+1.3
4,077,023	-		AO356_18090	0.76	-0.3
4,077,023	-		AO356_18090	0.76	-0.4
4,077,023	-		AO356_18090	0.76	+0.4
4,077,023	-		AO356_18090	0.76	-0.1
4,077,023	-		AO356_18090	0.76	-0.7
4,077,295	+				+0.5
4,077,295	+				+0.4
4,077,296	-				-2.4
4,077,296	-				+0.2
4,077,296	-				+1.4
4,077,296	-				-0.0
4,077,296	-				+0.4
4,077,455	+				-0.3
4,077,455	+				-0.1
4,077,455	+				+0.3
4,077,455	+				-1.6
4,077,455	+				-0.5
4,077,455	+				+1.2
4,077,455	+				+1.2
4,077,456	-				-0.8
4,077,456	-				+0.6
4,077,456	-				-0.3
4,077,456	-				+0.5
4,077,474	-		AO356_18095	0.12	-0.0
4,077,483	+		AO356_18095	0.13	-0.2
4,077,484	-		AO356_18095	0.13	-0.6
4,077,499	+		AO356_18095	0.15	-1.4
4,077,500	-		AO356_18095	0.15	+0.4
4,077,500	-		AO356_18095	0.15	+1.1
4,077,527	+		AO356_18095	0.18	+1.0
4,077,527	+		AO356_18095	0.18	-0.0
4,077,527	+		AO356_18095	0.18	+0.9
4,077,528	-		AO356_18095	0.18	-0.0
4,077,528	-		AO356_18095	0.18	+1.3
4,077,528	-		AO356_18095	0.18	+0.7
4,077,677	+		AO356_18095	0.35	+0.7
4,077,678	-		AO356_18095	0.35	+0.4
4,077,678	-		AO356_18095	0.35	+1.2
4,077,678	-		AO356_18095	0.35	+1.3
4,077,953	+		AO356_18095	0.66	-0.2
4,077,954	-		AO356_18095	0.66	-2.3
4,077,964	+		AO356_18095	0.68	-3.1
4,077,965	-		AO356_18095	0.68	+1.3
4,077,965	-		AO356_18095	0.68	+1.0
4,077,965	-		AO356_18095	0.68	+0.8
4,077,965	-		AO356_18095	0.68	+0.8
4,077,965	-		AO356_18095	0.68	+0.9
4,078,040	+		AO356_18095	0.76	+1.2
4,078,040	+		AO356_18095	0.76	-0.6
4,078,041	-		AO356_18095	0.76	+0.6
4,078,124	+		AO356_18095	0.86	+1.5
4,078,124	+		AO356_18095	0.86	+0.5
4,078,124	+		AO356_18095	0.86	+1.7
4,078,124	+		AO356_18095	0.86	+1.0
4,078,125	-		AO356_18095	0.86	-0.9
4,078,125	-		AO356_18095	0.86	+0.6
4,078,125	-		AO356_18095	0.86	+1.6
4,078,125	-		AO356_18095	0.86	-0.7
4,078,125	-		AO356_18095	0.86	+1.1
4,078,125	-		AO356_18095	0.86	+0.4
4,078,125	-		AO356_18095	0.86	+0.2
4,078,241	+				+0.3
4,078,242	-				-0.4
4,078,242	-				-0.9
4,078,242	-				+0.6
4,078,291	+				-0.8
4,078,291	+				-0.8
4,078,291	+				+2.4
4,078,291	+				+0.9
4,078,291	+				+1.0
4,078,291	+				+2.0
4,078,292	-				+1.2
4,078,300	+				-0.1
4,078,300	+				-0.5
4,078,300	+				+0.1
4,078,301	-				+0.6
4,078,301	-				-2.1