Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13050

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,967,519	+				-1.6
2,967,519	+				-3.2
2,967,520	-				-1.1
2,967,535	+				-2.7
2,967,535	+				+1.8
2,967,535	+				+0.3
2,967,535	+				-0.5
2,967,535	+				+1.0
2,967,535	+				-2.1
2,967,535	+				-1.3
2,967,536	-				+0.8
2,967,536	-				+2.0
2,967,536	-				-0.7
2,967,536	-				-0.2
2,967,536	-				-1.6
2,967,536	-				-1.0
2,967,536	-				+0.6
2,967,536	-				-1.7
2,967,536	-				-1.8
2,967,536	-				+0.9
2,967,536	-				+1.1
2,967,536	-				+0.2
2,967,536	-				-0.4
2,967,536	-				+1.6
2,967,744	+		AO356_13040	0.54	+0.7
2,967,746	+		AO356_13040	0.55	+0.9
2,967,746	+		AO356_13040	0.55	-1.6
2,967,746	+		AO356_13040	0.55	-0.5
2,967,746	+		AO356_13040	0.55	-1.1
2,967,746	+		AO356_13040	0.55	-2.5
2,967,746	+		AO356_13040	0.55	+0.1
2,967,746	+		AO356_13040	0.55	+0.7
2,967,746	+		AO356_13040	0.55	+0.1
2,967,746	+		AO356_13040	0.55	-1.6
2,967,746	+		AO356_13040	0.55	+1.3
2,967,746	+		AO356_13040	0.55	+0.2
2,967,746	+		AO356_13040	0.55	+0.1
2,967,746	+		AO356_13040	0.55	-1.1
2,967,746	+		AO356_13040	0.55	+1.2
2,967,746	+		AO356_13040	0.55	+0.6
2,967,746	+		AO356_13040	0.55	+1.0
2,967,747	-		AO356_13040	0.55	-1.6
2,967,747	-		AO356_13040	0.55	+0.1
2,967,747	-		AO356_13040	0.55	-0.0
2,967,747	-		AO356_13040	0.55	+0.5
2,967,747	-		AO356_13040	0.55	-3.5
2,967,747	-		AO356_13040	0.55	+0.9
2,967,747	-		AO356_13040	0.55	-2.4
2,967,747	-		AO356_13040	0.55	-0.1
2,967,747	-		AO356_13040	0.55	-0.7
2,967,747	-		AO356_13040	0.55	+1.4
2,967,747	-		AO356_13040	0.55	-0.2
2,967,896	+				+0.3
2,967,897	-				+1.2
2,967,897	-				-0.3
2,967,897	-				+1.6
2,967,917	+				-0.0
2,967,918	-				+0.8
2,968,087	+				-0.1
2,968,209	+		AO356_13045	0.34	+0.7
2,968,209	+		AO356_13045	0.34	+0.6
2,968,210	-		AO356_13045	0.35	+0.4
2,968,210	-				+0.8
2,968,210	-		AO356_13045	0.35	+1.0
2,968,299	+		AO356_13045	0.63	+0.8
2,968,299	+		AO356_13045	0.63	-1.0
2,968,299	+		AO356_13045	0.63	-0.1
2,968,299	+		AO356_13045	0.63	+1.1
2,968,299	+		AO356_13045	0.63	+0.3
2,968,299	+		AO356_13045	0.63	-0.1
2,968,300	-		AO356_13045	0.63	+0.3
2,968,300	-		AO356_13045	0.63	+0.8
2,968,300	-		AO356_13045	0.63	-1.5
2,968,300	-		AO356_13045	0.63	+0.3
2,968,300	-		AO356_13045	0.63	+1.3
2,968,300	-		AO356_13045	0.63	+1.9
2,968,300	-		AO356_13045	0.63	-2.1
2,968,300	-		AO356_13045	0.63	+2.3
2,968,300	-		AO356_13045	0.63	-0.5
2,968,389	-				-0.5
2,968,389	-				+1.6
2,968,420	+				-1.5
2,968,420	+				+0.8
2,968,420	+				+0.9
2,968,420	+				-1.4
2,968,420	+				-1.1
2,968,420	+				+0.5
2,968,420	+				+1.5
2,968,420	+				+1.4
2,968,420	+				+0.6
2,968,420	+				+1.2
2,968,420	+				-1.6
2,968,420	+				-1.4
2,968,420	+				+1.9
2,968,420	+				+0.7
2,968,420	+				-0.7
2,968,421	-				+0.4
2,968,421	-				-1.4
2,968,421	-				+0.0
2,968,421	-				-0.5
2,968,421	-				+0.9
2,968,421	-				-1.5
2,968,421	-				+1.8
2,968,421	-				+0.8
2,968,421	-				+1.7
2,968,421	-				+0.1
2,968,438	+				+1.2
2,968,438	+				+0.4
2,968,439	-				-1.1
2,968,442	+				-0.6
2,968,442	+				-1.7
2,968,442	+				-1.4
2,968,442	+				-0.5
2,968,442	+				+0.6
2,968,442	+				-0.4
2,968,442	+				-2.1
2,968,442	+				-1.6
2,968,442	+				+0.2
2,968,443	-				-0.0
2,968,443	-				-0.5
2,968,443	-				+1.0
2,968,443	-				+1.7
2,968,443	-				-1.6
2,968,443	-				+0.7
2,968,443	-				+0.7
2,968,443	-				+0.1
2,968,443	-				+0.2
2,968,455	+				+0.9
2,968,455	+				-1.1
2,968,455	+				-1.1
2,968,456	-				+0.7
2,968,456	-				+0.8
2,968,456	-				+1.2
2,968,724	+		AO356_13050	0.53	+1.2
2,968,724	+		AO356_13050	0.53	+0.0
2,968,724	+		AO356_13050	0.53	+0.0
2,968,725	-		AO356_13050	0.53	-0.1
2,968,725	-		AO356_13050	0.53	-1.0
2,968,725	-		AO356_13050	0.53	+1.9
2,968,725	-		AO356_13050	0.53	+1.0
2,968,844	+		AO356_13050	0.80	-1.1
2,968,845	-		AO356_13050	0.80	+2.1
2,968,845	-		AO356_13050	0.80	-2.0
2,968,907	+				-0.7
2,968,935	+				-0.3
2,968,935	+				+0.4
2,968,935	+				+1.5
2,968,935	+				-0.7
2,968,935	+				-0.8
2,968,935	+				+0.4
2,968,935	+				-1.5
2,968,936	-				+0.2
2,968,936	-				+1.3
2,968,936	-				+1.1
2,968,936	-				+0.6
2,968,936	-				-0.3
2,968,936	-				+0.4
2,969,084	+		AO356_13055	0.15	-0.9
2,969,084	+		AO356_13055	0.15	+0.9
2,969,084	+		AO356_13055	0.15	+1.3
2,969,084	+		AO356_13055	0.15	-0.1
2,969,084	+		AO356_13055	0.15	+1.2
2,969,084	+		AO356_13055	0.15	+0.6
2,969,085	-		AO356_13055	0.15	-0.1
2,969,085	-		AO356_13055	0.15	+2.2
2,969,085	-		AO356_13055	0.15	+1.0
2,969,085	-		AO356_13055	0.15	+0.7
2,969,102	+		AO356_13055	0.17	-0.2
2,969,102	+		AO356_13055	0.17	+1.2
2,969,102	+		AO356_13055	0.17	-1.2
2,969,102	+		AO356_13055	0.17	-2.5
2,969,102	+		AO356_13055	0.17	+0.1
2,969,102	+		AO356_13055	0.17	-2.2
2,969,103	-		AO356_13055	0.17	+0.2
2,969,103	-		AO356_13055	0.17	+0.3
2,969,103	-		AO356_13055	0.17	-0.3
2,969,103	-		AO356_13055	0.17	-1.4
2,969,103	-		AO356_13055	0.17	-0.4
2,969,319	+		AO356_13055	0.41	-0.8
2,969,319	+		AO356_13055	0.41	+0.3
2,969,319	+		AO356_13055	0.41	+0.4
2,969,319	+		AO356_13055	0.41	-0.4
2,969,320	-		AO356_13055	0.41	+0.3
2,969,320	-		AO356_13055	0.41	-0.7
2,969,320	-		AO356_13055	0.41	+0.8
2,969,320	-		AO356_13055	0.41	+2.9
2,969,553	+		AO356_13055	0.66	-0.6
2,969,553	+		AO356_13055	0.66	-0.2
2,969,554	-		AO356_13055	0.66	+1.0
2,969,554	-		AO356_13055	0.66	+0.3
2,969,618	-		AO356_13055	0.73	+0.4
2,969,751	-		AO356_13055	0.88	-0.8
2,969,751	-		AO356_13055	0.88	+0.2
2,969,751	-		AO356_13055	0.88	+1.3
2,969,842	+				+0.3
2,969,843	-				+0.6
2,969,843	-				-0.4
2,969,843	-				-0.7
2,969,848	+				-0.3
2,969,849	-				-0.1
2,969,849	-				+0.3
2,969,849	-				+1.0
2,969,849	-				+1.4
2,969,911	+				+1.4
2,969,912	-				-0.3
2,969,912	-				+1.5
2,969,928	-				+0.8