Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11420

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,588,779	+		AO356_11415	0.51	+1.6
2,588,780	-		AO356_11415	0.51	+1.8
2,588,891	+		AO356_11415	0.59	+1.0
2,588,891	+		AO356_11415	0.59	-2.1
2,588,892	-		AO356_11415	0.60	+1.6
2,589,005	+		AO356_11415	0.68	+1.7
2,589,107	+		AO356_11415	0.76	+1.2
2,589,108	-		AO356_11415	0.76	+0.3
2,589,108	-		AO356_11415	0.76	+0.7
2,589,156	+		AO356_11415	0.79	+0.4
2,589,156	+		AO356_11415	0.79	+0.8
2,589,157	-		AO356_11415	0.79	+1.3
2,589,157	-		AO356_11415	0.79	+1.8
2,589,157	-		AO356_11415	0.79	+1.8
2,589,157	-		AO356_11415	0.79	+1.2
2,589,157	-		AO356_11415	0.79	+2.3
2,589,157	-		AO356_11415	0.79	+1.7
2,589,157	-		AO356_11415	0.79	+0.2
2,589,157	-		AO356_11415	0.79	+1.8
2,589,157	-		AO356_11415	0.79	+0.6
2,589,157	-		AO356_11415	0.79	+0.7
2,589,157	-		AO356_11415	0.79	+1.1
2,589,408	-				+1.4
2,589,408	-				+2.6
2,589,425	+				+1.1
2,589,425	+				+1.5
2,589,425	+				+1.0
2,589,425	+				+0.5
2,589,425	+				+2.3
2,589,425	+				+1.5
2,589,425	+				+0.9
2,589,425	+				+1.1
2,589,425	+				+0.9
2,589,425	+				-0.1
2,589,425	+				+1.3
2,589,425	+				-0.3
2,589,426	-				+2.2
2,589,426	-				-1.6
2,589,426	-				-1.3
2,589,426	-				+1.2
2,589,426	-				+1.4
2,589,426	-				+1.8
2,589,446	+				+1.6
2,589,446	+				+2.2
2,589,446	+				+1.4
2,589,446	+				+1.2
2,589,446	+				+1.0
2,589,447	-				-3.0
2,589,447	-				+0.7
2,589,447	-				-1.5
2,589,447	-				-1.5
2,589,447	-				+0.1
2,589,447	-				-0.9
2,589,447	-				-2.8
2,589,447	-				-0.2
2,589,488	+				-2.0
2,589,489	-				+0.2
2,589,489	-				-1.5
2,589,489	-				-0.3
2,589,561	-				+1.6
2,589,699	+		AO356_11420	0.14	-3.1
2,589,699	+		AO356_11420	0.14	-2.9
2,589,699	+		AO356_11420	0.14	-3.1
2,589,700	-		AO356_11420	0.14	-2.8
2,589,700	-		AO356_11420	0.14	-2.3
2,589,700	-		AO356_11420	0.14	-3.0
2,589,700	-		AO356_11420	0.14	+1.0
2,589,783	+		AO356_11420	0.19	-2.5
2,589,783	+		AO356_11420	0.19	-0.6
2,589,783	+		AO356_11420	0.19	-1.6
2,589,783	+		AO356_11420	0.19	-1.1
2,589,783	+		AO356_11420	0.19	-1.8
2,589,783	+		AO356_11420	0.19	-1.3
2,589,783	+		AO356_11420	0.19	-2.5
2,589,783	+		AO356_11420	0.19	-3.4
2,589,784	-		AO356_11420	0.19	-3.2
2,589,784	-		AO356_11420	0.19	-0.5
2,589,784	-		AO356_11420	0.19	-2.7
2,589,784	-		AO356_11420	0.19	-0.4
2,589,784	-		AO356_11420	0.19	-2.9
2,590,010	+		AO356_11420	0.31	-2.1
2,590,011	-		AO356_11420	0.31	-2.7
2,590,011	-		AO356_11420	0.31	+0.0
2,590,011	-		AO356_11420	0.31	-2.5
2,590,011	-		AO356_11420	0.31	-2.3
2,590,248	-		AO356_11420	0.45	-3.0
2,590,402	+		AO356_11420	0.53	-2.2
2,590,479	+		AO356_11420	0.58	-1.5
2,590,479	+		AO356_11420	0.58	-0.8
2,590,479	+		AO356_11420	0.58	-0.6
2,590,479	+		AO356_11420	0.58	-2.1
2,590,480	-		AO356_11420	0.58	-1.7
2,590,480	-		AO356_11420	0.58	-2.8
2,590,480	-		AO356_11420	0.58	-3.2
2,590,480	-		AO356_11420	0.58	-3.0
2,590,480	-		AO356_11420	0.58	-2.5
2,590,868	+		AO356_11420	0.79	-2.3
2,590,869	-		AO356_11420	0.79	-0.8
2,590,869	-		AO356_11420	0.79	-0.6
2,590,869	-		AO356_11420	0.79	-2.1
2,591,064	+				-2.6
2,591,064	+				-3.6
2,591,187	+				-2.1
2,591,187	+				-2.3
2,591,188	-				-1.9
2,591,188	-				-2.3
2,591,217	+				-2.7
2,591,217	+				-2.9
2,591,217	+				-1.7
2,591,217	+				-1.7
2,591,217	+				-0.4
2,591,217	+				-1.6
2,591,217	+				-3.6
2,591,217	+				-1.4
2,591,217	+				-3.4
2,591,217	+				+0.3
2,591,218	-				-3.0
2,591,218	-				-0.9
2,591,218	-				-1.6
2,591,218	-				-1.4
2,591,218	-				-2.4
2,591,218	-				-2.5
2,591,258	+				-0.8
2,591,258	+				-0.2
2,591,258	+				-3.2
2,591,258	+				+1.7
2,591,258	+				-2.1
2,591,258	+				+0.1
2,591,258	+				-1.2
2,591,259	-				-2.8
2,591,259	-				+0.7
2,591,259	-				+0.8
2,591,259	-				-0.5
2,591,387	+				-2.7
2,591,387	+				-0.7
2,591,387	+				+0.5
2,591,387	+				+2.6
2,591,387	+				-1.3
2,591,387	+				-0.4
2,591,387	+				-0.7
2,591,388	-				+1.0
2,591,388	-				+2.2
2,591,388	-				+0.8
2,591,388	-				-0.8
2,591,556	-		AO356_11425	0.19	+0.2
2,591,556	-		AO356_11425	0.19	-0.2
2,591,739	+		AO356_11425	0.30	+0.2
2,591,740	-		AO356_11425	0.30	-1.6
2,591,740	-		AO356_11425	0.30	-0.3
2,591,781	+		AO356_11425	0.32	-1.3
2,591,781	+		AO356_11425	0.32	+0.1
2,591,782	-		AO356_11425	0.33	-1.8
2,591,782	-		AO356_11425	0.33	-0.8
2,591,783	+		AO356_11425	0.33	+0.1
2,591,783	+		AO356_11425	0.33	-0.8
2,591,783	+		AO356_11425	0.33	+0.8
2,591,783	+		AO356_11425	0.33	-2.4
2,591,783	+		AO356_11425	0.33	-1.9
2,591,783	+		AO356_11425	0.33	-2.7
2,591,783	+		AO356_11425	0.33	+0.9
2,591,783	+		AO356_11425	0.33	+1.5
2,591,783	+		AO356_11425	0.33	+1.3
2,591,783	+		AO356_11425	0.33	-1.8
2,591,783	+		AO356_11425	0.33	-0.3
2,591,783	+		AO356_11425	0.33	-0.8
2,591,783	+		AO356_11425	0.33	+2.1
2,591,783	+		AO356_11425	0.33	+1.0
2,591,783	+		AO356_11425	0.33	+0.4
2,591,783	+		AO356_11425	0.33	+0.0
2,591,783	+		AO356_11425	0.33	+1.6
2,591,783	+		AO356_11425	0.33	-2.1
2,591,783	+		AO356_11425	0.33	+0.4
2,591,783	+		AO356_11425	0.33	-0.4
2,591,783	+		AO356_11425	0.33	-0.5
2,591,783	+		AO356_11425	0.33	-0.9
2,591,783	+		AO356_11425	0.33	+0.7
2,591,783	+		AO356_11425	0.33	-0.3
2,591,783	+		AO356_11425	0.33	+0.1
2,591,783	+		AO356_11425	0.33	+2.3
2,591,784	-		AO356_11425	0.33	+0.1
2,591,784	-		AO356_11425	0.33	+0.8
2,591,784	-		AO356_11425	0.33	-1.3
2,591,784	-		AO356_11425	0.33	+0.0
2,591,784	-		AO356_11425	0.33	-0.3
2,591,784	-		AO356_11425	0.33	+0.3
2,591,784	-		AO356_11425	0.33	-1.6
2,591,784	-		AO356_11425	0.33	+1.0
2,591,784	-		AO356_11425	0.33	-2.5
2,591,784	-		AO356_11425	0.33	-1.8
2,591,784	-		AO356_11425	0.33	+0.2
2,591,784	-		AO356_11425	0.33	-1.3
2,591,784	-		AO356_11425	0.33	+2.0
2,591,784	-		AO356_11425	0.33	+0.2
2,591,784	-		AO356_11425	0.33	-0.1
2,591,784	-		AO356_11425	0.33	+0.7
2,591,784	-		AO356_11425	0.33	-1.1
2,591,784	-		AO356_11425	0.33	+1.2
2,591,784	-		AO356_11425	0.33	+0.6
2,591,784	-		AO356_11425	0.33	+1.2
2,591,784	-		AO356_11425	0.33	+0.4
2,591,784	-		AO356_11425	0.33	-0.1
2,591,784	-		AO356_11425	0.33	-1.2
2,591,784	-		AO356_11425	0.33	+1.0
2,591,784	-		AO356_11425	0.33	-0.3
2,591,784	-		AO356_11425	0.33	-0.8
2,591,784	-		AO356_11425	0.33	+1.8
2,591,784	-		AO356_11425	0.33	+0.4
2,591,784	-		AO356_11425	0.33	+0.3
2,591,784	-		AO356_11425	0.33	+0.9
2,591,784	-		AO356_11425	0.33	+0.6
2,591,784	-		AO356_11425	0.33	-0.9
2,591,890	-		AO356_11425	0.39	+0.7
2,591,990	+		AO356_11425	0.45	+0.4
2,591,990	+		AO356_11425	0.45	+0.0
2,591,990	+		AO356_11425	0.45	-0.3
2,591,991	-		AO356_11425	0.45	-0.5
2,591,991	-		AO356_11425	0.45	+1.2
2,591,991	-		AO356_11425	0.45	+0.2
2,592,176	+		AO356_11425	0.57	+0.2
2,592,176	+		AO356_11425	0.57	+0.2
2,592,176	+		AO356_11425	0.57	+0.1
2,592,177	-		AO356_11425	0.57	-0.5
2,592,204	-		AO356_11425	0.59	+0.4