Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05495

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,231,155	-		AO356_05490	0.60	-1.0
1,231,265	+		AO356_05490	0.67	+2.0
1,231,265	+		AO356_05490	0.67	+0.5
1,231,265	+		AO356_05490	0.67	+0.5
1,231,378	+		AO356_05490	0.74	-0.3
1,231,379	-		AO356_05490	0.74	+0.5
1,231,460	-		AO356_05490	0.78	-0.1
1,231,496	-		AO356_05490	0.81	+0.4
1,231,496	-		AO356_05490	0.81	+0.2
1,231,496	-		AO356_05490	0.81	+0.5
1,231,496	-		AO356_05490	0.81	+0.3
1,231,504	+		AO356_05490	0.81	-0.1
1,231,573	+		AO356_05490	0.85	-0.8
1,231,573	+		AO356_05490	0.85	+1.1
1,231,573	+		AO356_05490	0.85	+0.0
1,231,574	-		AO356_05490	0.85	-0.6
1,231,574	-		AO356_05490	0.85	+0.9
1,231,812	+				+2.7
1,231,812	+				+0.1
1,231,812	+				+1.5
1,231,812	+				-1.3
1,231,812	+				-2.5
1,231,812	+				-0.8
1,231,813	-				-0.7
1,231,813	-				-0.6
1,231,813	-				+0.9
1,231,813	-				+0.7
1,231,822	+				-0.9
1,231,822	+				-1.1
1,231,822	+				-1.1
1,231,822	+				+0.9
1,231,823	-				-2.3
1,231,823	-				+0.8
1,231,823	-				+1.2
1,231,939	+				-0.1
1,231,939	+				-2.0
1,231,939	+				+1.6
1,231,939	+				+0.4
1,231,939	+				-0.6
1,231,940	-				+0.1
1,231,940	-				-0.0
1,231,940	-				-0.6
1,231,940	-				-0.2
1,231,940	-				-0.2
1,231,940	-				+2.0
1,231,940	-				-0.8
1,231,976	+				+1.2
1,231,976	+				+1.4
1,231,976	+				+0.4
1,231,977	-				-0.2
1,231,977	-				-0.1
1,231,977	-				+1.4
1,231,977	-				+0.7
1,231,977	-				-1.6
1,232,019	+				-1.9
1,232,020	-				+1.1
1,232,020	-				-1.8
1,232,028	-				-0.7
1,232,028	-				-2.0
1,232,028	-				+0.1
1,232,046	+				+0.2
1,232,046	+				-1.3
1,232,046	+				+0.8
1,232,046	+				-1.2
1,232,047	-				-0.4
1,232,063	+				-0.5
1,232,063	+				+1.1
1,232,064	-				+1.1
1,232,064	-				-2.6
1,232,069	+				-1.7
1,232,069	+				-0.0
1,232,070	-				+2.4
1,232,070	-				+1.4
1,232,079	+				-2.0
1,232,101	-				-0.6
1,232,109	+				-2.0
1,232,109	+				-2.4
1,232,110	-				+1.6
1,232,110	-				+1.4
1,232,110	-				-0.5
1,232,138	-				+1.5
1,232,222	+				-1.0
1,232,222	+				-0.3
1,232,222	+				+0.5
1,232,223	-				-1.3
1,232,255	+		AO356_05495	0.13	+0.5
1,232,256	-		AO356_05495	0.14	+1.4
1,232,402	-		AO356_05495	0.32	+0.4
1,232,495	+		AO356_05495	0.44	+1.4
1,232,495	+		AO356_05495	0.44	+0.7
1,232,495	+		AO356_05495	0.44	+0.2
1,232,495	+		AO356_05495	0.44	-1.3
1,232,495	+		AO356_05495	0.44	-0.6
1,232,496	-		AO356_05495	0.44	+0.1
1,232,496	-		AO356_05495	0.44	+0.1
1,232,496	-		AO356_05495	0.44	+0.0
1,232,561	+		AO356_05495	0.52	+2.1
1,232,588	+		AO356_05495	0.56	+0.8
1,232,588	+		AO356_05495	0.56	+1.2
1,232,589	-		AO356_05495	0.56	+1.3
1,232,633	+		AO356_05495	0.62	+0.1
1,232,634	-		AO356_05495	0.62	+1.0
1,232,654	+		AO356_05495	0.64	-0.6
1,232,654	+		AO356_05495	0.64	-1.0
1,232,654	+		AO356_05495	0.64	-0.3
1,232,654	+		AO356_05495	0.64	-0.3
1,232,654	+		AO356_05495	0.64	-1.3
1,232,654	+		AO356_05495	0.64	-1.2
1,232,654	+		AO356_05495	0.64	+2.7
1,232,655	-		AO356_05495	0.64	-1.2
1,232,747	+		AO356_05495	0.76	-0.3
1,232,747	+		AO356_05495	0.76	+0.2
1,232,748	-		AO356_05495	0.76	+0.6
1,232,815	+		AO356_05495	0.85	+0.4
1,232,816	-		AO356_05495	0.85	+0.1
1,232,816	-		AO356_05495	0.85	+0.4
1,232,842	+		AO356_05495	0.88	-1.3
1,232,843	-		AO356_05495	0.89	+0.3
1,232,860	-				+0.5
1,232,860	-				-3.0
1,232,876	+				-0.1
1,232,918	+				+1.0
1,232,919	-				+0.9
1,232,930	+				-2.6
1,232,931	-				-0.7
1,232,931	-				+0.3
1,233,006	+				+0.4
1,233,007	-				+0.8
1,233,007	-				-1.7
1,233,185	+		AO356_05500	0.27	-1.1
1,233,185	+		AO356_05500	0.27	-1.1
1,233,185	+		AO356_05500	0.27	+1.0
1,233,185	+		AO356_05500	0.27	-1.2
1,233,185	+		AO356_05500	0.27	-0.8
1,233,186	-		AO356_05500	0.27	+0.7
1,233,186	-		AO356_05500	0.27	-1.3
1,233,239	+		AO356_05500	0.34	+1.6
1,233,239	+		AO356_05500	0.34	+0.7
1,233,239	+		AO356_05500	0.34	+0.7
1,233,290	+		AO356_05500	0.41	-0.6
1,233,290	+		AO356_05500	0.41	+0.7
1,233,290	+		AO356_05500	0.41	+0.7
1,233,290	+		AO356_05500	0.41	+0.5
1,233,291	-		AO356_05500	0.41	-1.2
1,233,291	-		AO356_05500	0.41	-0.6
1,233,291	-		AO356_05500	0.41	+1.2
1,233,291	-		AO356_05500	0.41	-0.7
1,233,291	-		AO356_05500	0.41	-2.1
1,233,291	-		AO356_05500	0.41	+1.4
1,233,291	-		AO356_05500	0.41	-2.0
1,233,341	+		AO356_05500	0.48	-1.4
1,233,341	+		AO356_05500	0.48	+0.2
1,233,342	-		AO356_05500	0.48	-0.1
1,233,342	-		AO356_05500	0.48	-1.3
1,233,350	+		AO356_05500	0.49	+2.0
1,233,351	-		AO356_05500	0.50	-2.2
1,233,351	-		AO356_05500	0.50	+0.5
1,233,420	-		AO356_05500	0.59	-0.1
1,233,420	-		AO356_05500	0.59	+1.2
1,233,593	+		AO356_05500	0.83	+2.6
1,233,593	+		AO356_05500	0.83	+1.3
1,233,594	-		AO356_05500	0.83	-0.3
1,233,594	-		AO356_05500	0.83	-0.9
1,233,594	-		AO356_05500	0.83	+0.1
1,233,605	+		AO356_05500	0.84	-0.2
1,233,606	-		AO356_05500	0.84	-2.9
1,233,632	+		AO356_05500	0.88	-1.3
1,233,632	+		AO356_05500	0.88	+1.6
1,233,632	+		AO356_05500	0.88	+1.4
1,233,632	+		AO356_05500	0.88	-1.5
1,233,632	+		AO356_05500	0.88	-0.2
1,233,632	+		AO356_05500	0.88	-0.2
1,233,633	-		AO356_05500	0.88	-0.7
1,233,633	-		AO356_05500	0.88	+0.0
1,233,633	-		AO356_05500	0.88	+0.7
1,233,633	-		AO356_05500	0.88	+1.0
1,233,633	-		AO356_05500	0.88	+0.2
1,233,736	+				-1.3
1,233,737	-				-1.3
1,233,737	-				+2.8
1,233,754	+				-0.1
1,233,754	+				-0.6
1,233,755	-				-0.5
1,233,874	+		AO356_05505	0.22	+1.2
1,233,874	+		AO356_05505	0.22	+1.0
1,233,874	+		AO356_05505	0.22	+1.1
1,233,875	-		AO356_05505	0.23	+0.7
1,233,875	-		AO356_05505	0.23	-1.0
1,233,875	-		AO356_05505	0.23	+0.1
1,233,875	-		AO356_05505	0.23	+0.4
1,233,878	+		AO356_05505	0.23	-0.1
1,233,879	-		AO356_05505	0.23	+1.0
1,233,898	+		AO356_05505	0.26	-1.0
1,233,898	+		AO356_05505	0.26	+0.1
1,233,898	+		AO356_05505	0.26	-2.3
1,233,898	+		AO356_05505	0.26	+0.8
1,233,898	+		AO356_05505	0.26	+1.8
1,233,898	+		AO356_05505	0.26	+0.3
1,233,904	+		AO356_05505	0.27	-1.6
1,233,904	+		AO356_05505	0.27	-2.7
1,233,904	+		AO356_05505	0.27	-0.1
1,233,905	-		AO356_05505	0.27	-0.1
1,233,905	-		AO356_05505	0.27	+1.9
1,233,905	-		AO356_05505	0.27	+0.6
1,233,905	-		AO356_05505	0.27	+1.1
1,233,905	-		AO356_05505	0.27	+0.2
1,233,905	-		AO356_05505	0.27	-1.5
1,233,905	-		AO356_05505	0.27	+0.4
1,233,905	-		AO356_05505	0.27	+0.2
1,233,905	-		AO356_05505	0.27	-0.9
1,233,928	+		AO356_05505	0.30	-1.5
1,233,928	+		AO356_05505	0.30	+1.4
1,233,928	+		AO356_05505	0.30	+1.0
1,233,929	-		AO356_05505	0.30	+0.8
1,233,929	-		AO356_05505	0.30	-1.0