Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3964

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
4,078,812	+		Ga0059261_3963	0.46	+0.5
4,078,813	-		Ga0059261_3963	0.46	+0.4
4,078,813	-		Ga0059261_3963	0.46	+0.6
4,078,813	-		Ga0059261_3963	0.46	+0.6
4,078,813	-		Ga0059261_3963	0.46	+0.1
4,079,043	+		Ga0059261_3963	0.61	-0.4
4,079,043	+		Ga0059261_3963	0.61	-0.7
4,079,043	+		Ga0059261_3963	0.61	-0.2
4,079,043	+		Ga0059261_3963	0.61	-0.4
4,079,043	+		Ga0059261_3963	0.61	-0.3
4,079,043	+		Ga0059261_3963	0.61	-0.2
4,079,044	-		Ga0059261_3963	0.61	+0.6
4,079,044	-		Ga0059261_3963	0.61	+0.1
4,079,044	-		Ga0059261_3963	0.61	+0.2
4,079,044	-		Ga0059261_3963	0.61	-0.3
4,079,302	+		Ga0059261_3963	0.78	+0.5
4,079,302	+		Ga0059261_3963	0.78	-0.1
4,079,303	-		Ga0059261_3963	0.79	+0.7
4,079,303	-		Ga0059261_3963	0.79	-0.1
4,079,303	-		Ga0059261_3963	0.79	+0.4
4,079,303	-		Ga0059261_3963	0.79	+0.5
4,079,303	-		Ga0059261_3963	0.79	+0.6
4,079,397	-		Ga0059261_3963	0.85	+0.7
4,079,397	-		Ga0059261_3963	0.85	-0.3
4,079,397	-		Ga0059261_3963	0.85	+0.1
4,079,397	-		Ga0059261_3963	0.85	+0.2
4,079,479	-				+0.5
4,079,577	+				+0.1
4,079,577	+				-0.2
4,079,577	+				+0.9
4,079,578	-				-0.0
4,079,578	-				-0.3
4,079,578	-				+1.2
4,079,607	+				-0.1
4,079,608	-				+0.1
4,079,608	-				+0.1
4,079,608	-				+0.9
4,079,633	+				+0.6
4,079,633	+				+0.5
4,079,634	-				+0.5
4,079,634	-				+1.6
4,079,669	+				+0.2
4,079,669	+				+0.4
4,079,731	+				+0.2
4,079,731	+				+0.7
4,079,731	+				+0.0
4,079,732	-				+0.3
4,079,732	-				+0.8
4,079,732	-				+0.3
4,079,733	-				+0.5
4,079,951	+		Ga0059261_3964	0.28	+1.1
4,079,951	+		Ga0059261_3964	0.28	-0.5
4,079,951	+		Ga0059261_3964	0.28	+0.1
4,079,952	-		Ga0059261_3964	0.28	+0.6
4,079,952	-		Ga0059261_3964	0.28	+0.4
4,079,952	-		Ga0059261_3964	0.28	+0.1
4,079,952	-		Ga0059261_3964	0.28	+0.6
4,079,952	-		Ga0059261_3964	0.28	-0.1
4,079,952	-		Ga0059261_3964	0.28	-0.1
4,080,251	+		Ga0059261_3964	0.53	+0.8
4,080,251	+		Ga0059261_3964	0.53	+0.6
4,080,251	+		Ga0059261_3964	0.53	-0.4
4,080,251	+		Ga0059261_3964	0.53	-0.1
4,080,251	+		Ga0059261_3964	0.53	-0.1
4,080,251	+		Ga0059261_3964	0.53	-0.0
4,080,252	-		Ga0059261_3964	0.53	-0.0
4,080,252	-		Ga0059261_3964	0.53	-0.3
4,080,252	-		Ga0059261_3964	0.53	+0.3
4,080,252	-		Ga0059261_3964	0.53	-0.1
4,080,252	-		Ga0059261_3964	0.53	+0.9
4,080,252	-		Ga0059261_3964	0.53	+0.3
4,080,252	-		Ga0059261_3964	0.53	+0.3
4,080,252	-		Ga0059261_3964	0.53	-0.0
4,080,270	+		Ga0059261_3964	0.55	+0.6
4,080,270	+				+1.0
4,080,270	+		Ga0059261_3964	0.55	-0.2
4,080,271	-		Ga0059261_3964	0.55	+0.1
4,080,271	-		Ga0059261_3964	0.55	+0.3
4,080,271	-		Ga0059261_3964	0.55	-0.4
4,080,271	-		Ga0059261_3964	0.55	+0.6
4,080,271	-		Ga0059261_3964	0.55	-0.3
4,080,271	-		Ga0059261_3964	0.55	+0.2
4,080,271	-		Ga0059261_3964	0.55	-0.3
4,080,271	-		Ga0059261_3964	0.55	+1.0
4,080,272	+		Ga0059261_3964	0.55	+0.0
4,080,272	+		Ga0059261_3964	0.55	+0.7
4,080,272	+		Ga0059261_3964	0.55	-0.2
4,080,272	+		Ga0059261_3964	0.55	-0.1
4,080,272	+		Ga0059261_3964	0.55	+0.2
4,080,273	-		Ga0059261_3964	0.55	-0.3
4,080,273	-		Ga0059261_3964	0.55	+0.1
4,080,273	-		Ga0059261_3964	0.55	+0.6
4,080,273	-		Ga0059261_3964	0.55	+1.4
4,080,273	-		Ga0059261_3964	0.55	-0.6
4,080,390	-		Ga0059261_3964	0.65	-0.1
4,080,390	-		Ga0059261_3964	0.65	-0.1
4,080,390	-		Ga0059261_3964	0.65	+0.7
4,080,539	+		Ga0059261_3964	0.77	+0.5
4,080,539	+		Ga0059261_3964	0.77	+0.2
4,080,539	+		Ga0059261_3964	0.77	+0.5
4,080,540	-		Ga0059261_3964	0.77	-0.1
4,080,540	-		Ga0059261_3964	0.77	+0.3
4,080,540	-		Ga0059261_3964	0.77	+0.1
4,080,540	-		Ga0059261_3964	0.77	-1.3
4,080,540	-		Ga0059261_3964	0.77	+0.4
4,080,540	-		Ga0059261_3964	0.77	+0.5
4,080,540	-		Ga0059261_3964	0.77	-1.6
4,080,690	+				+0.5
4,080,690	+				+0.1
4,080,692	+				+0.8
4,080,692	+				-0.0
4,080,692	+				+0.6
4,080,692	+				+0.1
4,080,692	+				+0.0
4,080,692	+				-1.2
4,080,692	+				+1.0
4,080,692	+				+0.1
4,080,692	+				+1.6
4,080,692	+				+0.0
4,080,693	-				+0.5
4,080,693	-				+0.3
4,080,693	-				+0.5
4,080,693	-				+0.7
4,080,693	-				+1.6
4,080,693	-				-0.4
4,080,693	-				+0.4
4,080,813	+				-0.5
4,080,813	+				+0.3
4,080,813	+				+0.6
4,080,813	+				+0.1
4,080,813	+				-0.3
4,080,813	+				+0.3
4,080,842	-				+0.3
4,081,104	+		Ga0059261_3965	0.19	+0.3
4,081,104	+		Ga0059261_3965	0.19	+0.3
4,081,104	+		Ga0059261_3965	0.19	+0.8
4,081,104	+		Ga0059261_3965	0.19	+1.1
4,081,161	+		Ga0059261_3965	0.23	+0.8
4,081,161	+		Ga0059261_3965	0.23	+0.6
4,081,162	-		Ga0059261_3965	0.23	+0.4
4,081,162	-		Ga0059261_3965	0.23	+1.4
4,081,162	-		Ga0059261_3965	0.23	+0.4
4,081,209	+		Ga0059261_3965	0.26	+0.5
4,081,209	+		Ga0059261_3965	0.26	+1.0
4,081,209	+		Ga0059261_3965	0.26	+0.8
4,081,210	-		Ga0059261_3965	0.26	+0.1
4,081,210	-		Ga0059261_3965	0.26	+1.3
4,081,289	+		Ga0059261_3965	0.32	+0.3
4,081,289	+		Ga0059261_3965	0.32	+0.8
4,081,508	+		Ga0059261_3965	0.49	+1.3
4,081,508	+		Ga0059261_3965	0.49	-0.1
4,081,509	-		Ga0059261_3965	0.49	+0.5
4,081,538	+		Ga0059261_3965	0.51	+0.9
4,081,538	+		Ga0059261_3965	0.51	+0.1
4,081,539	-		Ga0059261_3965	0.51	+0.6
4,081,721	+		Ga0059261_3965	0.64	+0.3