Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24530 and BWI76_RS24535 are separated by 46 nucleotides BWI76_RS24535 and BWI76_RS24540 are separated by 8 nucleotides BWI76_RS24540 and BWI76_RS24545 are separated by 13 nucleotides BWI76_RS24545 and BWI76_RS24550 are separated by 233 nucleotides
BWI76_RS24530: BWI76_RS24530 - cytosine/purines uracil thiamine allantoin permease, at 5,113,275 to 5,114,882
_RS24530
BWI76_RS24535: BWI76_RS24535 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 5,114,929 to 5,115,942
_RS24535
BWI76_RS24540: BWI76_RS24540 - hypothetical protein, at 5,115,951 to 5,116,166
_RS24540
BWI76_RS24545: BWI76_RS24545 - 30S ribosomal protein S21, at 5,116,180 to 5,116,395
_RS24545
BWI76_RS24550: BWI76_RS24550 - DNA primase, at 5,116,629 to 5,118,374
_RS24550
Position (kb)
5114
5115
5116 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5113.941 kb on - strand, within BWI76_RS24530 at 5113.945 kb on + strand, within BWI76_RS24530 at 5113.953 kb on - strand, within BWI76_RS24530 at 5114.064 kb on + strand, within BWI76_RS24530 at 5114.064 kb on + strand, within BWI76_RS24530 at 5114.148 kb on + strand, within BWI76_RS24530 at 5114.150 kb on + strand, within BWI76_RS24530 at 5114.150 kb on + strand, within BWI76_RS24530 at 5114.156 kb on - strand at 5114.174 kb on - strand, within BWI76_RS24530 at 5114.229 kb on - strand, within BWI76_RS24530 at 5114.372 kb on - strand, within BWI76_RS24530 at 5114.381 kb on + strand, within BWI76_RS24530 at 5114.389 kb on - strand, within BWI76_RS24530 at 5114.428 kb on + strand, within BWI76_RS24530 at 5114.565 kb on + strand, within BWI76_RS24530 at 5114.710 kb on + strand, within BWI76_RS24530 at 5114.718 kb on - strand, within BWI76_RS24530 at 5114.757 kb on - strand at 5114.762 kb on - strand at 5114.864 kb on + strand at 5114.864 kb on + strand at 5115.956 kb on - strand at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5115.982 kb on - strand, within BWI76_RS24540 at 5116.003 kb on - strand, within BWI76_RS24540 at 5116.012 kb on + strand, within BWI76_RS24540 at 5116.017 kb on + strand, within BWI76_RS24540 at 5116.526 kb on + strand at 5116.531 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 5,113,941 - BWI76_RS24530 0.41 -1.0 5,113,945 + BWI76_RS24530 0.42 -0.9 5,113,953 - BWI76_RS24530 0.42 -0.6 5,114,064 + BWI76_RS24530 0.49 -0.6 5,114,064 + BWI76_RS24530 0.49 -0.9 5,114,148 + BWI76_RS24530 0.54 -0.5 5,114,150 + BWI76_RS24530 0.54 -0.4 5,114,150 + BWI76_RS24530 0.54 +0.1 5,114,156 - -0.7 5,114,174 - BWI76_RS24530 0.56 -2.1 5,114,229 - BWI76_RS24530 0.59 -1.4 5,114,372 - BWI76_RS24530 0.68 +0.1 5,114,381 + BWI76_RS24530 0.69 -0.7 5,114,389 - BWI76_RS24530 0.69 -1.1 5,114,428 + BWI76_RS24530 0.72 +0.6 5,114,565 + BWI76_RS24530 0.80 -0.5 5,114,710 + BWI76_RS24530 0.89 -1.0 5,114,718 - BWI76_RS24530 0.90 +1.7 5,114,757 - -0.6 5,114,762 - +2.6 5,114,864 + -0.8 5,114,864 + +0.5 5,115,956 - +0.5 5,115,982 - BWI76_RS24540 0.14 +1.5 5,115,982 - BWI76_RS24540 0.14 -0.1 5,115,982 - BWI76_RS24540 0.14 -0.5 5,115,982 - BWI76_RS24540 0.14 -0.0 5,115,982 - BWI76_RS24540 0.14 +0.3 5,115,982 - BWI76_RS24540 0.14 +0.2 5,115,982 - BWI76_RS24540 0.14 +1.6 5,116,003 - BWI76_RS24540 0.24 +0.1 5,116,012 + BWI76_RS24540 0.28 +0.7 5,116,017 + BWI76_RS24540 0.31 +1.1 5,116,526 + +0.2 5,116,531 + +0.1
Or see this region's nucleotide sequence