Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10925 and BWI76_RS10930 are separated by 252 nucleotides BWI76_RS10930 and BWI76_RS10935 overlap by 8 nucleotides
BWI76_RS10925: BWI76_RS10925 - glucans biosynthesis protein C, at 2,306,188 to 2,307,348
_RS10925
BWI76_RS10930: BWI76_RS10930 - glucan biosynthesis protein G, at 2,307,601 to 2,309,154
_RS10930
BWI76_RS10935: BWI76_RS10935 - glucan biosynthesis glucosyltransferase H, at 2,309,147 to 2,311,675
_RS10935
Position (kb)
2307
2308
2309
2310 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2306.666 kb on - strand, within BWI76_RS10925 at 2306.736 kb on - strand, within BWI76_RS10925 at 2306.982 kb on + strand, within BWI76_RS10925 at 2307.040 kb on + strand, within BWI76_RS10925 at 2307.048 kb on - strand, within BWI76_RS10925 at 2307.076 kb on + strand, within BWI76_RS10925 at 2307.229 kb on + strand, within BWI76_RS10925 at 2307.229 kb on + strand at 2307.229 kb on + strand, within BWI76_RS10925 at 2307.440 kb on - strand at 2307.440 kb on - strand at 2307.462 kb on + strand at 2307.470 kb on - strand at 2307.483 kb on + strand at 2307.483 kb on + strand at 2307.491 kb on - strand at 2307.491 kb on - strand at 2307.492 kb on - strand at 2307.635 kb on + strand at 2307.635 kb on + strand at 2307.646 kb on + strand at 2307.654 kb on - strand at 2307.689 kb on + strand at 2307.734 kb on + strand at 2307.742 kb on - strand at 2307.759 kb on + strand, within BWI76_RS10930 at 2307.767 kb on - strand, within BWI76_RS10930 at 2307.767 kb on - strand, within BWI76_RS10930 at 2307.782 kb on + strand, within BWI76_RS10930 at 2307.978 kb on + strand, within BWI76_RS10930 at 2307.991 kb on + strand, within BWI76_RS10930 at 2307.991 kb on + strand, within BWI76_RS10930 at 2307.991 kb on + strand, within BWI76_RS10930 at 2307.991 kb on + strand, within BWI76_RS10930 at 2307.997 kb on - strand, within BWI76_RS10930 at 2307.999 kb on - strand, within BWI76_RS10930 at 2308.325 kb on - strand, within BWI76_RS10930 at 2308.504 kb on - strand, within BWI76_RS10930 at 2308.544 kb on + strand, within BWI76_RS10930 at 2308.633 kb on - strand, within BWI76_RS10930 at 2308.882 kb on + strand, within BWI76_RS10930 at 2309.377 kb on + strand at 2309.383 kb on - strand at 2309.655 kb on - strand, within BWI76_RS10935 at 2309.778 kb on - strand, within BWI76_RS10935 at 2309.847 kb on + strand, within BWI76_RS10935 at 2310.070 kb on - strand, within BWI76_RS10935
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 2,306,666 - BWI76_RS10925 0.41 +0.0 2,306,736 - BWI76_RS10925 0.47 +0.3 2,306,982 + BWI76_RS10925 0.68 -0.6 2,307,040 + BWI76_RS10925 0.73 +0.6 2,307,048 - BWI76_RS10925 0.74 -0.3 2,307,076 + BWI76_RS10925 0.76 +1.0 2,307,229 + BWI76_RS10925 0.90 +0.5 2,307,229 + -0.4 2,307,229 + BWI76_RS10925 0.90 +0.2 2,307,440 - -0.1 2,307,440 - -0.3 2,307,462 + +0.8 2,307,470 - -0.2 2,307,483 + +0.9 2,307,483 + +1.2 2,307,491 - +0.3 2,307,491 - +0.5 2,307,492 - +0.1 2,307,635 + -1.4 2,307,635 + -0.3 2,307,646 + +0.6 2,307,654 - -2.0 2,307,689 + -1.8 2,307,734 + -0.9 2,307,742 - -2.7 2,307,759 + BWI76_RS10930 0.10 -1.0 2,307,767 - BWI76_RS10930 0.11 -1.5 2,307,767 - BWI76_RS10930 0.11 -1.0 2,307,782 + BWI76_RS10930 0.12 -1.2 2,307,978 + BWI76_RS10930 0.24 -0.6 2,307,991 + BWI76_RS10930 0.25 -1.0 2,307,991 + BWI76_RS10930 0.25 -0.0 2,307,991 + BWI76_RS10930 0.25 -0.3 2,307,991 + BWI76_RS10930 0.25 -0.5 2,307,997 - BWI76_RS10930 0.25 -0.9 2,307,999 - BWI76_RS10930 0.26 -0.7 2,308,325 - BWI76_RS10930 0.47 -1.8 2,308,504 - BWI76_RS10930 0.58 -1.0 2,308,544 + BWI76_RS10930 0.61 -1.2 2,308,633 - BWI76_RS10930 0.66 -1.8 2,308,882 + BWI76_RS10930 0.82 -0.9 2,309,377 + -0.7 2,309,383 - -1.0 2,309,655 - BWI76_RS10935 0.20 -0.6 2,309,778 - BWI76_RS10935 0.25 -0.4 2,309,847 + BWI76_RS10935 0.28 -0.5 2,310,070 - BWI76_RS10935 0.36 +3.7
Or see this region's nucleotide sequence