Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10425

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,351,793	+		AO356_10420	0.39	-0.2
2,351,793	+		AO356_10420	0.39	-0.9
2,351,794	-		AO356_10420	0.39	+0.2
2,351,973	+		AO356_10420	0.66	+0.6
2,351,974	-		AO356_10420	0.67	+0.0
2,351,992	+		AO356_10420	0.69	-0.8
2,351,992	+		AO356_10420	0.69	+0.6
2,351,993	-		AO356_10420	0.69	+1.0
2,352,024	+		AO356_10420	0.74	+1.3
2,352,024	+		AO356_10420	0.74	+0.8
2,352,024	+		AO356_10420	0.74	+0.6
2,352,024	+		AO356_10420	0.74	+1.1
2,352,024	+		AO356_10420	0.74	+1.3
2,352,024	+		AO356_10420	0.74	+0.3
2,352,024	+		AO356_10420	0.74	-0.8
2,352,024	+		AO356_10420	0.74	+0.0
2,352,024	+		AO356_10420	0.74	-2.6
2,352,024	+		AO356_10420	0.74	-0.5
2,352,024	+		AO356_10420	0.74	+1.8
2,352,024	+		AO356_10420	0.74	-0.2
2,352,024	+		AO356_10420	0.74	+0.0
2,352,025	-		AO356_10420	0.74	-0.0
2,352,025	-		AO356_10420	0.74	-0.2
2,352,025	-		AO356_10420	0.74	+0.9
2,352,025	-		AO356_10420	0.74	+0.4
2,352,025	-		AO356_10420	0.74	+1.6
2,352,025	-		AO356_10420	0.74	-0.7
2,352,025	-		AO356_10420	0.74	+0.4
2,352,025	-		AO356_10420	0.74	+1.9
2,352,025	-		AO356_10420	0.74	-1.5
2,352,025	-		AO356_10420	0.74	+0.5
2,352,025	-		AO356_10420	0.74	-2.6
2,352,048	+		AO356_10420	0.78	+0.7
2,352,048	+		AO356_10420	0.78	+0.3
2,352,048	+		AO356_10420	0.78	+1.5
2,352,048	+		AO356_10420	0.78	+0.8
2,352,048	+		AO356_10420	0.78	+0.6
2,352,048	+		AO356_10420	0.78	-1.6
2,352,048	+		AO356_10420	0.78	-1.8
2,352,048	+		AO356_10420	0.78	+1.5
2,352,049	-		AO356_10420	0.78	+0.3
2,352,049	-		AO356_10420	0.78	-0.2
2,352,049	-		AO356_10420	0.78	-2.4
2,352,049	-		AO356_10420	0.78	+0.3
2,352,175	+				-1.4
2,352,175	+				+1.8
2,352,175	+				-0.1
2,352,175	+				-1.1
2,352,176	-				+0.4
2,352,176	-				-0.3
2,352,184	-				+0.1
2,352,254	-				+0.6
2,352,254	-				-0.4
2,352,257	+				-0.4
2,352,257	+				+1.1
2,352,257	+				+0.8
2,352,257	+				+1.8
2,352,257	+				+2.7
2,352,257	+				+1.4
2,352,257	+				-1.3
2,352,257	+				+0.7
2,352,258	-				-0.9
2,352,258	-				+0.2
2,352,258	-				-2.4
2,352,258	-				+0.3
2,352,258	-				+2.0
2,352,258	-				+0.3
2,352,258	-				-0.6
2,352,258	-				-1.6
2,352,258	-				+0.9
2,352,258	-				+0.9
2,352,258	-				+0.2
2,352,258	-				-0.2
2,352,258	-				+1.3
2,352,258	-				+0.5
2,352,286	-				-0.2
2,352,371	+				+1.4
2,352,372	-				-2.2
2,352,372	-				-3.0
2,352,422	+				+0.7
2,352,422	+				+2.9
2,352,422	+				-1.6
2,352,422	+				-2.1
2,352,422	+				+1.3
2,352,422	+				+0.0
2,352,422	+				+2.2
2,352,422	+				-0.2
2,352,423	-				-1.7
2,352,423	-				+0.8
2,352,423	-				+0.2
2,352,423	-				-0.2
2,352,423	-				+0.8
2,352,423	-				-0.1
2,352,423	-				+0.2
2,352,423	-				+0.6
2,352,423	-				+1.8
2,352,448	-				+0.5
2,352,480	+				+1.4
2,352,480	+				+0.4
2,352,480	+				-0.3
2,352,481	-				+1.9
2,352,481	-				+0.7
2,352,481	-				-0.2
2,352,481	-				+2.0
2,352,481	-				-0.5
2,352,481	-				+1.2
2,352,481	-				+0.3
2,352,592	+				+0.7
2,352,592	+				+2.1
2,352,592	+				-0.7
2,352,592	+				-0.0
2,352,592	+				-0.5
2,352,593	-				+1.1
2,352,646	+				+1.4
2,352,646	+				-0.8
2,352,646	+				+0.6
2,352,647	-				+0.0
2,352,680	+				-2.0
2,352,680	+				+0.7
2,352,719	+				-1.0
2,352,720	-				+3.9
2,352,720	-				-0.4
2,352,827	+		AO356_10425	0.17	+0.2
2,352,828	-		AO356_10425	0.17	-1.4
2,352,828	-		AO356_10425	0.17	-1.2
2,352,828	-		AO356_10425	0.17	-2.8
2,352,874	-		AO356_10425	0.23	-0.1
2,352,893	+		AO356_10425	0.26	+0.6
2,352,893	+		AO356_10425	0.26	-0.6
2,352,893	+		AO356_10425	0.26	+1.1
2,352,893	+		AO356_10425	0.26	+0.4
2,352,893	+		AO356_10425	0.26	+1.0
2,352,893	+		AO356_10425	0.26	+0.9
2,352,893	+		AO356_10425	0.26	-0.5
2,352,893	+		AO356_10425	0.26	-2.5
2,352,893	+		AO356_10425	0.26	+0.0
2,352,893	+		AO356_10425	0.26	+1.6
2,352,893	+		AO356_10425	0.26	-0.4
2,352,893	+		AO356_10425	0.26	+0.0
2,352,893	+		AO356_10425	0.26	+1.1
2,352,893	+		AO356_10425	0.26	-0.2
2,352,893	+		AO356_10425	0.26	+0.8
2,352,894	-		AO356_10425	0.26	+1.5
2,352,894	-		AO356_10425	0.26	-0.4
2,352,894	-		AO356_10425	0.26	-1.6
2,352,894	-		AO356_10425	0.26	-0.4
2,352,894	-		AO356_10425	0.26	-0.1
2,352,894	-		AO356_10425	0.26	+0.8
2,352,894	-		AO356_10425	0.26	-0.8
2,352,894	-		AO356_10425	0.26	-0.8
2,352,894	-		AO356_10425	0.26	-1.8
2,352,894	-		AO356_10425	0.26	-2.3
2,353,139	+		AO356_10425	0.57	-1.0
2,353,139	+		AO356_10425	0.57	+1.0
2,353,140	-		AO356_10425	0.57	-0.6
2,353,140	-		AO356_10425	0.57	+0.1
2,353,140	-		AO356_10425	0.57	-1.5
2,353,151	+		AO356_10425	0.59	+0.8
2,353,151	+		AO356_10425	0.59	-2.3
2,353,229	+		AO356_10425	0.69	+1.0
2,353,229	+		AO356_10425	0.69	+0.3
2,353,247	+		AO356_10425	0.71	-2.0
2,353,247	+		AO356_10425	0.71	-0.7
2,353,247	+		AO356_10425	0.71	-2.3
2,353,247	+		AO356_10425	0.71	+1.2
2,353,247	+		AO356_10425	0.71	-1.9
2,353,248	-		AO356_10425	0.71	+0.9
2,353,248	-		AO356_10425	0.71	+0.8
2,353,248	-		AO356_10425	0.71	+2.1
2,353,248	-		AO356_10425	0.71	+0.9
2,353,295	+		AO356_10425	0.77	-0.8
2,353,295	+		AO356_10425	0.77	+2.0
2,353,295	+		AO356_10425	0.77	+0.1
2,353,295	+		AO356_10425	0.77	+0.6
2,353,516	+				-2.4
2,353,517	-				-1.7
2,353,565	+				+1.1
2,353,566	-				+0.6
2,353,566	-				-0.0
2,353,566	-				-0.7
2,353,566	-				+0.2
2,353,592	-				+1.5
2,353,631	+				+1.6
2,353,756	+				+0.5
2,353,756	+				-0.9
2,354,041	+		AO356_10430	0.31	+0.8
2,354,041	+		AO356_10430	0.31	-1.9
2,354,041	+		AO356_10430	0.31	-0.3
2,354,042	-		AO356_10430	0.31	+1.7
2,354,042	-		AO356_10430	0.31	+0.3
2,354,042	-		AO356_10430	0.31	-0.4
2,354,042	-		AO356_10430	0.31	+1.8
2,354,042	-		AO356_10430	0.31	+0.8
2,354,042	-		AO356_10430	0.31	-0.5
2,354,042	-		AO356_10430	0.31	-0.5
2,354,042	-		AO356_10430	0.31	-0.3
2,354,056	+		AO356_10430	0.32	+0.8
2,354,057	-		AO356_10430	0.32	-0.6
2,354,057	-		AO356_10430	0.32	+1.2
2,354,128	+		AO356_10430	0.40	+0.5
2,354,128	+		AO356_10430	0.40	-1.9
2,354,128	+		AO356_10430	0.40	-0.1
2,354,129	-		AO356_10430	0.40	-3.0
2,354,135	-		AO356_10430	0.41	-1.9
2,354,135	-		AO356_10430	0.41	-0.3
2,354,317	+		AO356_10430	0.60	-2.1
2,354,317	+		AO356_10430	0.60	-1.3
2,354,317	+		AO356_10430	0.60	-0.4
2,354,317	+		AO356_10430	0.60	-1.7
2,354,317	+		AO356_10430	0.60	-1.4
2,354,318	-		AO356_10430	0.60	-1.6
2,354,318	-		AO356_10430	0.60	-1.1
2,354,377	+		AO356_10430	0.66	+1.3
2,354,377	+		AO356_10430	0.66	+0.1
2,354,377	+		AO356_10430	0.66	+0.2
2,354,377	+		AO356_10430	0.66	-2.2
2,354,377	+		AO356_10430	0.66	-2.7
2,354,392	+		AO356_10430	0.68	-0.9
2,354,416	+		AO356_10430	0.71	-1.1
2,354,416	+		AO356_10430	0.71	+1.0
2,354,416	+		AO356_10430	0.71	-1.9
2,354,417	-		AO356_10430	0.71	+0.8
2,354,417	-		AO356_10430	0.71	+0.6