Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1298 and Ga0059261_1299 overlap by 4 nucleotides Ga0059261_1299 and Ga0059261_1300 are separated by 63 nucleotides Ga0059261_1300 and Ga0059261_1301 are separated by 213 nucleotides
Ga0059261_1298: Ga0059261_1298 - Glycosyltransferases involved in cell wall biogenesis, at 1,364,533 to 1,365,648
_1298
Ga0059261_1299: Ga0059261_1299 - D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family, at 1,365,645 to 1,367,084
_1299
Ga0059261_1300: Ga0059261_1300 - hypothetical protein, at 1,367,148 to 1,367,465
_1300
Ga0059261_1301: Ga0059261_1301 - Methyltransferase domain, at 1,367,679 to 1,368,410
_1301
Position (kb)
1365
1366
1367
1368 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.873 kb on + strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.874 kb on - strand, within Ga0059261_1299 at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.875 kb on + strand at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.875 kb on + strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1365.876 kb on - strand, within Ga0059261_1299 at 1366.134 kb on + strand, within Ga0059261_1299 at 1366.135 kb on - strand, within Ga0059261_1299 at 1366.236 kb on + strand, within Ga0059261_1299 at 1366.236 kb on + strand, within Ga0059261_1299 at 1366.319 kb on + strand, within Ga0059261_1299 at 1366.319 kb on + strand at 1366.320 kb on - strand, within Ga0059261_1299 at 1366.320 kb on - strand, within Ga0059261_1299 at 1366.322 kb on + strand, within Ga0059261_1299 at 1366.322 kb on + strand, within Ga0059261_1299 at 1366.322 kb on + strand, within Ga0059261_1299 at 1366.323 kb on - strand, within Ga0059261_1299 at 1366.323 kb on - strand, within Ga0059261_1299 at 1366.355 kb on + strand, within Ga0059261_1299 at 1366.356 kb on - strand, within Ga0059261_1299 at 1366.398 kb on + strand, within Ga0059261_1299 at 1366.398 kb on + strand, within Ga0059261_1299 at 1366.398 kb on + strand, within Ga0059261_1299 at 1366.399 kb on - strand, within Ga0059261_1299 at 1366.399 kb on - strand, within Ga0059261_1299 at 1366.470 kb on + strand, within Ga0059261_1299 at 1366.520 kb on - strand, within Ga0059261_1299 at 1366.520 kb on - strand, within Ga0059261_1299 at 1366.764 kb on + strand, within Ga0059261_1299 at 1366.765 kb on - strand, within Ga0059261_1299 at 1366.765 kb on - strand, within Ga0059261_1299 at 1366.765 kb on - strand, within Ga0059261_1299 at 1366.765 kb on - strand, within Ga0059261_1299 at 1366.765 kb on - strand, within Ga0059261_1299 at 1366.962 kb on + strand at 1366.963 kb on - strand at 1366.963 kb on - strand at 1367.004 kb on + strand at 1367.004 kb on + strand at 1367.005 kb on - strand at 1367.005 kb on - strand at 1367.062 kb on + strand at 1367.063 kb on - strand at 1367.142 kb on - strand at 1367.164 kb on + strand at 1367.164 kb on + strand at 1367.165 kb on - strand at 1367.187 kb on + strand, within Ga0059261_1300 at 1367.187 kb on + strand, within Ga0059261_1300 at 1367.187 kb on + strand, within Ga0059261_1300 at 1367.256 kb on - strand, within Ga0059261_1300 at 1367.288 kb on + strand, within Ga0059261_1300 at 1367.288 kb on + strand, within Ga0059261_1300 at 1367.289 kb on - strand, within Ga0059261_1300 at 1367.305 kb on + strand, within Ga0059261_1300 at 1367.466 kb on - strand at 1367.535 kb on + strand at 1367.585 kb on + strand at 1367.614 kb on - strand at 1367.614 kb on - strand at 1367.619 kb on - strand at 1367.620 kb on + strand at 1367.620 kb on + strand at 1367.620 kb on + strand at 1367.621 kb on - strand at 1367.623 kb on + strand at 1367.623 kb on + strand at 1367.947 kb on + strand at 1367.947 kb on + strand, within Ga0059261_1301 at 1367.947 kb on + strand, within Ga0059261_1301 at 1367.948 kb on - strand, within Ga0059261_1301 at 1368.080 kb on + strand, within Ga0059261_1301
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,365,873 + Ga0059261_1299 0.16 -0.1 1,365,873 + Ga0059261_1299 0.16 -0.7 1,365,873 + Ga0059261_1299 0.16 -0.2 1,365,873 + Ga0059261_1299 0.16 +0.0 1,365,873 + Ga0059261_1299 0.16 +0.3 1,365,873 + Ga0059261_1299 0.16 -0.0 1,365,873 + Ga0059261_1299 0.16 +0.3 1,365,874 - Ga0059261_1299 0.16 +0.7 1,365,874 - Ga0059261_1299 0.16 -0.0 1,365,874 - Ga0059261_1299 0.16 +1.1 1,365,874 - Ga0059261_1299 0.16 -0.2 1,365,874 - Ga0059261_1299 0.16 +0.1 1,365,874 - Ga0059261_1299 0.16 -0.6 1,365,874 - Ga0059261_1299 0.16 -0.3 1,365,875 + Ga0059261_1299 0.16 +1.0 1,365,875 + Ga0059261_1299 0.16 -0.4 1,365,875 + +0.5 1,365,875 + Ga0059261_1299 0.16 -0.1 1,365,875 + Ga0059261_1299 0.16 -0.7 1,365,875 + Ga0059261_1299 0.16 +0.5 1,365,875 + Ga0059261_1299 0.16 -0.8 1,365,876 - Ga0059261_1299 0.16 +0.0 1,365,876 - Ga0059261_1299 0.16 -1.0 1,365,876 - Ga0059261_1299 0.16 -0.4 1,365,876 - Ga0059261_1299 0.16 -0.8 1,365,876 - Ga0059261_1299 0.16 -0.1 1,365,876 - Ga0059261_1299 0.16 -0.0 1,365,876 - Ga0059261_1299 0.16 +0.5 1,365,876 - Ga0059261_1299 0.16 +0.7 1,365,876 - Ga0059261_1299 0.16 -0.7 1,365,876 - Ga0059261_1299 0.16 -0.1 1,366,134 + Ga0059261_1299 0.34 -0.9 1,366,135 - Ga0059261_1299 0.34 -0.9 1,366,236 + Ga0059261_1299 0.41 +0.4 1,366,236 + Ga0059261_1299 0.41 +0.7 1,366,319 + Ga0059261_1299 0.47 +0.3 1,366,319 + -1.7 1,366,320 - Ga0059261_1299 0.47 -0.4 1,366,320 - Ga0059261_1299 0.47 +0.9 1,366,322 + Ga0059261_1299 0.47 +0.5 1,366,322 + Ga0059261_1299 0.47 +0.7 1,366,322 + Ga0059261_1299 0.47 +0.2 1,366,323 - Ga0059261_1299 0.47 -1.1 1,366,323 - Ga0059261_1299 0.47 -0.6 1,366,355 + Ga0059261_1299 0.49 -0.1 1,366,356 - Ga0059261_1299 0.49 +0.1 1,366,398 + Ga0059261_1299 0.52 -0.3 1,366,398 + Ga0059261_1299 0.52 -0.2 1,366,398 + Ga0059261_1299 0.52 +0.3 1,366,399 - Ga0059261_1299 0.52 -0.4 1,366,399 - Ga0059261_1299 0.52 +0.2 1,366,470 + Ga0059261_1299 0.57 -0.5 1,366,520 - Ga0059261_1299 0.61 -1.3 1,366,520 - Ga0059261_1299 0.61 +0.1 1,366,764 + Ga0059261_1299 0.78 +0.0 1,366,765 - Ga0059261_1299 0.78 -1.7 1,366,765 - Ga0059261_1299 0.78 +0.7 1,366,765 - Ga0059261_1299 0.78 +0.4 1,366,765 - Ga0059261_1299 0.78 +0.5 1,366,765 - Ga0059261_1299 0.78 -0.3 1,366,962 + -0.6 1,366,963 - +0.6 1,366,963 - -0.3 1,367,004 + +0.1 1,367,004 + +0.1 1,367,005 - -0.3 1,367,005 - -1.5 1,367,062 + -0.4 1,367,063 - -0.1 1,367,142 - -2.2 1,367,164 + -0.4 1,367,164 + -1.0 1,367,165 - -1.8 1,367,187 + Ga0059261_1300 0.12 -0.2 1,367,187 + Ga0059261_1300 0.12 +0.0 1,367,187 + Ga0059261_1300 0.12 +0.3 1,367,256 - Ga0059261_1300 0.34 +1.0 1,367,288 + Ga0059261_1300 0.44 -0.1 1,367,288 + Ga0059261_1300 0.44 +0.2 1,367,289 - Ga0059261_1300 0.44 +0.3 1,367,305 + Ga0059261_1300 0.49 +0.9 1,367,466 - -0.6 1,367,535 + -0.3 1,367,585 + +0.0 1,367,614 - +0.2 1,367,614 - -0.5 1,367,619 - +0.5 1,367,620 + +0.1 1,367,620 + +0.2 1,367,620 + +0.8 1,367,621 - +0.3 1,367,623 + +0.0 1,367,623 + +2.3 1,367,947 + +0.3 1,367,947 + Ga0059261_1301 0.37 +0.6 1,367,947 + Ga0059261_1301 0.37 +1.2 1,367,948 - Ga0059261_1301 0.37 +1.1 1,368,080 + Ga0059261_1301 0.55 +1.2
Or see this region's nucleotide sequence