Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19650

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,404,268	-				-0.3
4,404,335	+				+0.4
4,404,335	+				+1.1
4,404,335	+				+0.5
4,404,335	+				+0.9
4,404,336	-				-1.6
4,404,336	-				+0.1
4,404,336	-				-0.8
4,404,336	-				+1.7
4,404,336	-				-1.1
4,404,336	-				+1.7
4,404,336	-				+2.7
4,404,336	-				+0.6
4,404,336	-				+0.2
4,404,443	-				-0.7
4,404,443	-				-0.9
4,404,443	-				+0.3
4,404,457	+				+0.4
4,404,458	-				-0.1
4,404,596	-		AO356_19645	0.25	-0.3
4,404,596	-		AO356_19645	0.25	-0.3
4,404,596	-		AO356_19645	0.25	-0.1
4,404,596	-		AO356_19645	0.25	+0.8
4,404,596	-		AO356_19645	0.25	-0.6
4,404,652	-		AO356_19645	0.32	+0.7
4,404,679	+		AO356_19645	0.35	-1.8
4,404,680	-		AO356_19645	0.35	-1.3
4,404,680	-		AO356_19645	0.35	+0.2
4,404,908	-		AO356_19645	0.64	-0.8
4,404,908	-		AO356_19645	0.64	-1.4
4,404,908	-		AO356_19645	0.64	-0.3
4,404,908	-		AO356_19645	0.64	-2.1
4,404,955	+		AO356_19645	0.70	-2.5
4,404,956	-		AO356_19645	0.70	-2.6
4,404,967	+		AO356_19645	0.72	+0.7
4,404,967	+		AO356_19645	0.72	+0.4
4,404,968	-		AO356_19645	0.72	-0.3
4,405,000	+		AO356_19645	0.76	-1.8
4,405,000	+		AO356_19645	0.76	-1.1
4,405,000	+		AO356_19645	0.76	+0.0
4,405,001	-		AO356_19645	0.76	-1.5
4,405,001	-		AO356_19645	0.76	-0.9
4,405,180	+				+1.0
4,405,180	+				-0.9
4,405,184	+				-1.4
4,405,185	-				-1.8
4,405,226	+				+0.0
4,405,227	-				+0.6
4,405,230	+				+1.3
4,405,230	+				+1.1
4,405,230	+				-0.7
4,405,231	-				-2.2
4,405,231	-				-2.3
4,405,231	-				+1.4
4,405,231	-				-0.5
4,405,231	-				+0.0
4,405,259	+				-1.4
4,405,370	+		AO356_19650	0.14	+0.9
4,405,370	+		AO356_19650	0.14	-2.7
4,405,385	+		AO356_19650	0.16	-2.0
4,405,385	+		AO356_19650	0.16	-1.9
4,405,386	-		AO356_19650	0.16	+0.7
4,405,469	+		AO356_19650	0.22	+0.0
4,405,469	+		AO356_19650	0.22	-2.6
4,405,470	-		AO356_19650	0.22	-0.6
4,405,470	-		AO356_19650	0.22	-0.5
4,405,679	+		AO356_19650	0.38	+0.3
4,405,680	-		AO356_19650	0.38	+1.0
4,405,706	+		AO356_19650	0.40	-1.5
4,405,707	-		AO356_19650	0.40	-1.8
4,405,724	+		AO356_19650	0.42	-0.5
4,405,724	+		AO356_19650	0.42	-0.2
4,405,724	+		AO356_19650	0.42	-3.0
4,405,725	-		AO356_19650	0.42	-1.5
4,405,725	-		AO356_19650	0.42	-2.1
4,405,754	+		AO356_19650	0.44	+0.7
4,405,754	+		AO356_19650	0.44	-1.8
4,405,754	+		AO356_19650	0.44	+0.3
4,405,754	+		AO356_19650	0.44	+0.2
4,405,754	+		AO356_19650	0.44	-1.4
4,405,754	+		AO356_19650	0.44	-0.5
4,405,754	+		AO356_19650	0.44	-1.0
4,405,754	+		AO356_19650	0.44	+1.3
4,405,754	+		AO356_19650	0.44	-0.1
4,405,755	-		AO356_19650	0.44	-1.5
4,405,755	-		AO356_19650	0.44	-1.4
4,405,755	-		AO356_19650	0.44	-0.8
4,405,826	+		AO356_19650	0.49	-1.2
4,405,827	-		AO356_19650	0.50	+0.3
4,405,827	-		AO356_19650	0.50	-0.3
4,405,827	-		AO356_19650	0.50	-0.8
4,405,943	+		AO356_19650	0.59	+0.6
4,405,943	+		AO356_19650	0.59	-1.4
4,405,943	+		AO356_19650	0.59	+0.8
4,405,943	+		AO356_19650	0.59	-1.6
4,405,944	-		AO356_19650	0.59	-2.3
4,405,944	-		AO356_19650	0.59	-1.0
4,405,944	-		AO356_19650	0.59	-0.0
4,405,944	-		AO356_19650	0.59	-1.2
4,405,946	+		AO356_19650	0.59	+0.3
4,405,946	+		AO356_19650	0.59	-0.6
4,405,946	+		AO356_19650	0.59	+2.3
4,405,947	-		AO356_19650	0.59	-2.0
4,406,000	+		AO356_19650	0.63	-0.6
4,406,000	+		AO356_19650	0.63	-2.5
4,406,000	+		AO356_19650	0.63	-0.1
4,406,001	-		AO356_19650	0.63	+0.9
4,406,114	+		AO356_19650	0.72	+0.0
4,406,114	+		AO356_19650	0.72	+1.7
4,406,114	+		AO356_19650	0.72	-2.9
4,406,114	+		AO356_19650	0.72	-0.0
4,406,114	+		AO356_19650	0.72	-2.7
4,406,114	+		AO356_19650	0.72	+1.8
4,406,114	+		AO356_19650	0.72	-0.1
4,406,115	-		AO356_19650	0.72	-0.6
4,406,115	-		AO356_19650	0.72	-1.1
4,406,115	-		AO356_19650	0.72	-0.6
4,406,115	-		AO356_19650	0.72	+1.0
4,406,115	-		AO356_19650	0.72	-0.3
4,406,115	-		AO356_19650	0.72	-0.0
4,406,117	+		AO356_19650	0.72	+0.7
4,406,117	+		AO356_19650	0.72	-2.0
4,406,118	-		AO356_19650	0.72	+0.3
4,406,118	-		AO356_19650	0.72	+0.9
4,406,118	-		AO356_19650	0.72	+0.7
4,406,118	-		AO356_19650	0.72	-0.6
4,406,132	+		AO356_19650	0.73	-0.6
4,406,132	+		AO356_19650	0.73	-2.2
4,406,154	-		AO356_19650	0.75	+0.7
4,406,219	+		AO356_19650	0.80	-1.7
4,406,393	+				-0.6
4,406,393	+				-0.4
4,406,393	+				-2.1
4,406,394	-				-0.6
4,406,394	-				-0.3
4,406,409	+				-0.3
4,406,409	+				-1.4
4,406,409	+				-2.5
4,406,410	-				-0.8
4,406,494	+				+0.6
4,406,495	-				-3.1
4,406,525	+				+0.0
4,406,525	+				+0.9
4,406,525	+				+0.6
4,406,525	+				-1.2
4,406,526	-				-0.0
4,406,588	+				-0.8
4,406,592	-				+0.3
4,406,626	+				-0.3
4,406,627	-				-0.3
4,406,630	+				-1.6
4,406,630	+				-2.4
4,406,630	+				+2.9
4,406,631	-				+1.4
4,406,631	-				-2.4
4,406,698	+				-1.3
4,406,698	+				+1.0
4,406,699	-				-0.9
4,406,699	-				-0.9
4,406,790	-				+1.1
4,406,790	-				-0.2
4,406,847	+				-1.2
4,406,847	+				-0.1
4,406,847	+				-3.5
4,406,847	+				-2.5
4,406,847	+				-1.1
4,406,847	+				+0.3
4,406,847	+				-0.4
4,406,847	+				+0.3
4,406,847	+				-0.7
4,406,847	+				+0.1
4,406,847	+				-1.6
4,406,847	+				+0.2
4,406,847	+				-3.0
4,406,848	-				-0.7
4,406,848	-				-0.9
4,406,848	-				-0.0
4,406,848	-				+0.3
4,406,848	-				+0.9
4,406,848	-				+0.3
4,406,851	+				-0.3
4,406,851	+				-1.0
4,406,851	+				+2.2
4,406,851	+				-0.4
4,406,851	+				+1.0
4,406,851	+				-0.5
4,406,852	-				-0.3
4,406,852	-				-1.9
4,406,852	-				-1.3
4,406,852	-				-1.8
4,406,853	+				-0.3
4,406,853	+				-2.3
4,406,853	+				-2.3
4,406,853	+				+0.1
4,406,853	+				-1.1
4,406,853	+				+2.1
4,406,854	-				-2.3
4,406,854	-				+2.2
4,406,854	-				+1.2
4,406,901	+				-0.1
4,406,901	+				-0.1
4,406,901	+				-1.8
4,406,902	-				+0.6
4,407,074	+		AO356_19655	0.20	-2.5
4,407,183	-		AO356_19655	0.32	+0.9
4,407,264	-		AO356_19655	0.42	-1.8
4,407,264	-		AO356_19655	0.42	+1.2
4,407,264	-		AO356_19655	0.42	+1.3
4,407,380	+		AO356_19655	0.55	+1.8
4,407,381	-		AO356_19655	0.56	-0.7
4,407,381	-		AO356_19655	0.56	-2.0